Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq2481 125 6e-24 seq2467 113 4e-20 seq190 104 2e-17 seq2476 91.5 1e-13 >seq2481 Length=1366164 Score = 125 bits (138), Expect = 6e-24 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || ||||| || || || ||| ||||||| || || || || || Sbjct 516827 ATGCAGATCTTCGTGAAGACTTTGACTGGCAAGACGATCACTCTCGAGGTCGAGTCCTCC 516768 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | | ||| || ||||| |||||||| || ||||| ||||||||| Sbjct 516767 GACACCATCGATAACGTGAAAGCCAAGATTCAGGACAAGGAAGGAATTCCTCCCGATCAA 516708 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || ||||| || |||||||| || | || ||| |||||| | || ||||||||| Sbjct 516707 CAGCGCCTTATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCACTCTTTCTGATTACAAC 516648 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGG 22445 || || || || || || | || | ||| | || | |||||||| Sbjct 516647 ATCCAGAAGGAGTCTACTCTCCACCTTGTTCTCCGTCTCCGCGGAGG 516601 Score = 122 bits (134), Expect = 7e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 |||||||| || || || ||||| || || || || |||| || ||||| ||| | | Sbjct 516371 ATGCAAATCTTCGTGAAGACTTTGACGGGCAAGACCATCACCCTCGAAGTTGAATCGTCA 516312 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | ||| || |||| || ||||| || |||||||| || ||||| || ||| Sbjct 516311 GACACCATCGACAATGTCAAGGCCAAGATTCAGGATAAGGAGGGGATCCCACCTGACCAA 516252 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || | || ||||| ||||| ||||| |||||| | | || |||| ||||||||| Sbjct 516251 CAGCGCTTGATCTTTGCTGGCAAGCAGTTGGAGGATGGCAGGACGCTCTCTGATTACAAC 516192 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || ||||| Sbjct 516191 ATCCAGAAGGAGTCCAC 516175 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || ||||| || || | ||||| || || |||| || || || || | || Sbjct 516599 ATGCAGATCTTTGTCAAGACCCTCACCGGAAAGACTATCACCCTCGAGGTTGAGTCTTCC 516540 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || ||| || ||||||||||| || |||||||| || ||| Sbjct 516539 GACACAATCGACAACGTTAAGGCAAAGATCCAAGACAAGGAAGGAATTCCACCTGACCAA 516480 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 |||||| | || || || || || ||||| |||||| ||||| | || || || ||| Sbjct 516479 CAACGTTTGATTTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACATTGTCGGACTATAAC 516420 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGT 22446 ||||| || ||||| || | ||| | || | || |||| || ||| Sbjct 516419 ATTCAGAAGGAATCTACTCTTCATCTCGTCCTTCGTCTGCGTGGTGGT 516372 Score = 87.8 bits (96), Expect = 2e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 22322 GTATTCCACCCGATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCA 22381 |||| |||||||| ||||| || || || || || ||||| ||| | |||||| |||| Sbjct 516952 GTATCCCACCCGACCAACAGCGCCTCATCTTCGCTGGCAAGCAGCTTGAGGATGGTCGCA 516893 Query 22382 CCGTCTCCGATTACAACATTCAAAAAGAATCCACCATACAT 22422 || |||| ||||||||||| || || ||||||||| | ||| Sbjct 516892 CCCTCTCGGATTACAACATCCAGAAGGAATCCACCCTCCAT 516852 >seq2467 Length=211848 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || |||| || || || || || || Sbjct 155642 ATGCAGATCTTCGTGAAGACGCTTACTGGCAAGACCATCACCCTGGAGGTCGAGTCCTCC 155701 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || || | ||| | | || || || || ||||||||||| || || ||||||||| Sbjct 155702 GACACGATCGACAACGTAAAGGCGAAGATCCAGGACAAGGAGGGCATCCCTCCCGATCAA 155761 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || ||||||||||| ||| | ||||| ||||||| |||| || |||||| Sbjct 155762 CAGCGCCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAAC 155821 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTT 22448 || || || || || || | ||| | || ||||| | ||||| || || Sbjct 155822 ATCCAGAAGGAGTCAACGCTCCATCTTGTCTTGCGTCTTCGCGGCGGGTT 155871 >seq190 Length=61660 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || || ||||||| ||||| || || | Sbjct 10172 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTTGAGTCCTCG 10113 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || || |||| || ||||| |||||||||||||| || ||| | || Sbjct 10112 GACACCATCGATAATGTCAAGGCGAAGATTCAGGACAAGGAGGGTATCCCTCCCAACCAG 10053 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || ||||| || || ||||||||||| | |||||| ||| || | || || ||||| Sbjct 10052 CAGCGTCTCATCTTCGCCGGCAAACAACTCGAGGATGGCCGTACTCTTTCTGACTACAAT 9993 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTT 22448 ||||| || || || || | ||| | || | || | ||||| || || Sbjct 9992 ATTCAGAAGGAGTCGACGCTCCATCTTGTCCTCCGTCTTCGCGGTGGATT 9943 >seq2476 Length=877278 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || ||||| || | || || || || |||| || || || ||| | | Sbjct 851022 ATGCAGATCTTCGTTAAGACGCTGACTGGCAAGACCATCACCCTCGAGGTCGAATCATCG 851081 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || ||| | || | |||| || ||||| ||||||||||| || || ||||| ||| Sbjct 851082 GACACCATCGATAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAA 851141 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || |||||||| || | ||||| |||||| | || || |||||| Sbjct 851142 CAGCGCCTCATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACTCTTTCTGACTACAAC 851201 Query 22399 ATTCAAAAAGAATCCACCATACATTTAGTTTTGCGATTGCGCGGAGGTTT 22448 || || || || || || | || | || |||| | ||||| || || Sbjct 851202 ATCCAGAAGGAGTCGACGCTCCACCTTGTCCTGCGTCTTCGCGGCGGGTT 851251 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419715063064885