Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq1750 104 5e-17 seq2461 102 2e-16 >seq1750 Length=1054334 Score = 104 bits (114), Expect = 5e-17 Identities = 125/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 251545 TATTCAGATACACGGCGTTCGAAGAAATTAGACTTGCCCTCCAGAGAGATTAGCTCCATG 251604 || ||||| || || ||||||||| || | |||||||| ||| ||||| | |||||| Sbjct 416305 TAGTCAGAGACGCGCTTTTCGAAGAAGTTCGTCTTGCCCTGCAGCGAGATCATGTCCATG 416246 Query 251605 AAGTCGAAGGGGTTTGTGGCATTGTACTGCTTGGGATGGCCAAGTGCTACGAAGATGCGG 251664 ||||||||||| || || | ||||||| |||| | |||||| | ||| | || || Sbjct 416245 AAGTCGAAGGGATTCGTCGAATTGTACACCTTGTCGTTGCCAAGGGATACAAGGAGACGA 416186 Query 251665 TCTGCCACAAACTCCAGATACTGTCCCATCAGTTCAGAGTTCATGCCAAT 251714 || ||||| || || | ||||| | ||| || | | ||||||||| || Sbjct 416185 TCAGCCACGAATTCAATGTACTGGCACATGAGCTTCGCGTTCATGCCGAT 416136 Score = 102 bits (112), Expect = 2e-16 Identities = 306/465 (66%), Gaps = 17/465 (4%) Strand=Plus/Minus Query 251844 GTGCAGACCCTCGTCGCGACTGATGAACTCGTTGGACAGACCCAGGCCAGGCATCACCCC 251903 ||||| |||||||| |||||||||| ||||||||| | | || |||||||| | || Sbjct 415954 GTGCATGCCCTCGTCACGACTGATGAGCTCGTTGGAGAAAGTAAGACCAGGCATAAGACC 415895 Query 251904 ACGGTTCCTGAGCCAGAAGATTGCGCAAAAGGATCCAGAGAACAGCAGACCCTCGACACA 251963 || ||| | | ||||||||| | | || || || ||||| | | |||||||||| Sbjct 415894 GCGCTTCTTCAACCAGAAGATAGAGGCGAATGAACCTGAGAAGAAGATACCCTCGACAGC 415835 Query 251964 CACCCATGCAACAAGGCGCTCAGCAAACGACTTGTCCTGCGAC--AAGAACTTC--TGTG 252019 | | ||||| || ||||||||||| | | | ||| | | || | || | | Sbjct 415834 GGCGAAGGCAACGAGACGCTCAGCAAATGTCGATTGCTG-GTCTGAAATCCATCGAAGAG 415776 Query 252020 CCCATGCTGCCTT---CTT--TCCAACCGCGGGGATTGTTTCGATTGCATCAAAGAGAGA 252074 |||| | ||||| ||| | || |||||| |||||||| || |||||||| | Sbjct 415775 CCCACTCGGCCTTGCGCTTGATACA-----GGGGATAGTTTCGATAGCGTCAAAGAGGTA 415721 Query 252075 GTTCCGCTCGGCATCGTCCTCGATGAGCGCATCAAGCAGGAGAGAGTACATCTCCGAATG 252134 || ||||||||| |||| |||| | || | || | || || |||| || || Sbjct 415720 GTCGCGCTCGGCAATATCCTTGATGTAGGTGTCGATCAACAATGAATAGGTCTCAGAGTG 415661 Query 252135 GATGGATTCGTTGAACATCTGGTAAGCATAGAATAGACGCGCGGAAGGGTCGGTGACTTC 252194 |||| || | | |||||| || | ||||| || || || | | ||||| Sbjct 415660 GATGTTCTCCATCATTATCTGGAAACCGTAGAAGCAGCGAGCCTCAGCGACTTGCACTTC 415601 Query 252195 CGTGGAAAAGTTGTTTG-CAATGTTCTCCATCACCATGCCATCGCTGCCTGCAAAGAAGC 252253 | || || ||| | | | ||| || | || |||||||| | || ||||| Sbjct 415600 GTTCGAGAA-ACGTTCGACGAGGTTTTCGTTGACAATGCCATCCGAAGCGGCGAAGAAAG 415542 Query 252254 CAAGAATGGTCTTGATGAAGTGACGCTCATCGTCGTTGAGCTTGT 252298 | |||| | ||||||||||||||| | ||||| ||||||| Sbjct 415541 CGAGAACGTGAGAGATGAAGTGACGCTCGCCATCGTTCAGCTTGT 415497 >seq2461 Length=915284 Score = 102 bits (112), Expect = 2e-16 Identities = 132/182 (73%), Gaps = 3/182 (2%) Strand=Plus/Minus Query 280179 GGACCCAATGGTGCGGGTAAGTCTACCCTAATCAAAGTCCTGACTGGCGAGACCCAGGCC 280238 || ||||| ||| | || ||||||||||| |||| | || | || || | || || Sbjct 172523 GGGCCCAACGGTTCCGGCAAGTCTACCCTCGTCAAGTTGCTCATCGGTGATATGGAGCCC 172464 Query 280239 ACTGAGGGGTCCG---TTTGGAAGCATCCCAACATGCGGATGGCTTACGTCGCTCAGCAC 280295 | |||| || | |||||||| |||||| || || | |||||||||||||||| Sbjct 172463 AACAAGGGCGGCGAGATCTGGAAGCACCCCAACTTGGTCATCGGTTACGTCGCTCAGCAC 172404 Query 280296 GCTTTCCACCACATCGAGAACCACCTGGACATGACTCCTAACCAATACATTCAGTGGCGC 280355 || |||||||||||||| ||||| || |||| |||||| | | ||||| | ||||| Sbjct 172403 GCCTTCCACCACATCGATAACCATCTCGACAAGACTCCCCTCGAGTACATGCTTTGGCGT 172344 Query 280356 TA 280357 || Sbjct 172343 TA 172342 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027803495196889