Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq2481 122 7e-23 seq2476 105 6e-18 seq190 95.1 1e-14 >seq2481 Length=1366164 Score = 122 bits (134), Expect = 7e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 ||||| || || || ||||||||||| | ||| || |||||| ||||| || || Sbjct 516631 GTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCGAGTTGCTTGCCG 516690 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| |||| || |||||||| || |||||||| ||||| ||||| |||||| ||| Sbjct 516691 GCGAAGATAAGGCGCTGTTGATCGGGAGGAATTCCTTCCTTGTCCTGAATCTTGGCTTTC 516750 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | |||||||| ||| ||||| || | || | ||| ||||| |||| ||| Sbjct 516751 ACGTTATCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATCGTCTTGCCAGTCAAAGTC 516810 Query 114366 TTTACAAAAATCTGCAT 114382 || || || |||||||| Sbjct 516811 TTCACGAAGATCTGCAT 516827 >seq2476 Length=877278 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 ||||| || || | || || | || | ||| || || || || |||||||| || Sbjct 851248 CCGCCGCGAAGACGCAGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCAGAA 851189 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | ||| || || || ||||| || || ||| ||||||| ||||||||||| ||||| Sbjct 851188 AGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGAGGG 851129 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 ||||| || ||||| |||||| || | | || | |||||| | |||||||| Sbjct 851128 ATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTATCGATGGTGTCCGATGATTCGACC 851069 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || | ||| | || ||||| ||||| || || || || ||||||||| Sbjct 851068 TCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTAACGAAGATCTGCATG 851021 >seq190 Length=61660 Score = 95.1 bits (104), Expect = 1e-14 Identities = 144/205 (70%), Gaps = 0/205 (0%) Strand=Plus/Plus Query 114179 ATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTG 114238 ||| | ||| || || || ||||| ||||| || | |||||| ||| || ||||| Sbjct 9969 ATGGAGCGTCGACTCCTTCTGAATATTGTAGTCAGAAAGAGTACGGCCATCCTCGAGTTG 10028 Query 114239 TTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTT 114298 ||| || ||| ||||||||||||| |||| ||||| || || || ||||| |||||| Sbjct 10029 TTTGCCGGCGAAGATGAGACGCTGCTGGTTGGGAGGGATACCCTCCTTGTCCTGAATCTT 10088 Query 114299 TTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGT 114358 || | | || | |||||| | ||| || || || | || | || ||||| || Sbjct 10089 CGCCTTGACATTATCGATGGTGTCCGAGGACTCAACTTCGAGAGTGATGGTCTTGCCAGT 10148 Query 114359 CAGAGTTTTTACAAAAATCTGCATG 114383 || || || || || ||||||||| Sbjct 10149 GAGGGTCTTCACGAAGATCTGCATG 10173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420121450538748