Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_009127.1 Length=295146 Score E Sequences producing significant alignments: (Bits) Value seq1750 201 2e-46 seq2043 102 2e-16 >seq1750 Length=1054334 Score = 201 bits (222), Expect = 2e-46 Identities = 321/455 (71%), Gaps = 7/455 (2%) Strand=Plus/Plus Query 42423 CTGGCCTTCTTCGCCGCCTCTGACGGCATAGTCAATGAGAACCTGGCCACCAGGTTCATG 42482 || || ||||||||||| || || ||||| ||||| || ||||| | | | ||| | Sbjct 415538 CTCGCTTTCTTCGCCGCTTCGGATGGCATTGTCAACGAAAACCTCGTCGAACGTTTCTCG 415597 Query 42483 AAAGAGGTGCAGTACTTTGAGGCGCGCTGCTTCTACGGCTTCCAGATAGCCATAGAGAAC 42542 || || ||||| | |||||| |||||||||||||| ||||||||| || |||||| Sbjct 415598 AACGAAGTGCAAGTCGCTGAGGCTCGCTGCTTCTACGGTTTCCAGATAATGATGGAGAAC 415657 Query 42543 GTGCACTCTGAGGTGTACGCCAAACTGCTCAACACGTACATCCTGGATCCCGTCGAGCGT 42602 | ||||||||| || | || || |||| |||||| |||| | |||||| Sbjct 415658 ATCCACTCTGAGACCTATTCATTGTTGATCGACACCTACATCAAGGATATTGCCGAGCGC 415717 Query 42603 AACGGGCTGTTCAAGGCCATGGAGACGATGCCCTGCATCAAGAAGAAGGCGGACTGGGCG 42662 || || || | || || || || || ||||| |||||| ||||| || ||||| Sbjct 415718 GACTACCTCTTTGACGCTATCGAAACTATCCCCTGTATCAAGCGCAAGGCCGAGTGGGCT 415777 Query 42663 CTCAACTGGATCGAGAGTCCCG-ACGCAACGTTCGGCGAGAGGCTGGTAGCCTTTACCGC 42721 || ||||| || || | | | || || | ||| | || || ||||| |||| Sbjct 415778 CTTCGATGGATTTC-AGACCAGCAATCGACATTTGCTGAGCGTCTCGTTGCCTTCGCCGC 415836 Query 42722 CGTCGAGGGCATCTTCTTCTCGGGCGCCTTCGCCTCCATCTTCTGGCTCAAGCAG-AAGG 42780 |||||||| ||||||||||| || | |||||||| ||||||||| | ||| || || Sbjct 415837 TGTCGAGGGTATCTTCTTCTCAGGTTCATTCGCCTCTATCTTCTGGTTGAAGAAGCGCGG 415896 Query 42781 TGTCGATGCCCGGACTCACCTTCTCGAACGAACTCATCAGCAGGGACGAGGGGCTGCATA 42840 | | ||||| || || || ||||| ||||| |||||||| | |||||||| |||| | Sbjct 415897 TCT-TATGCCTGGTCTTACTTTCTCCAACGAGCTCATCAGTCGTGACGAGGGCATGCACA 415955 Query 42841 GGGACTTTGCCTGCCTCCTGTTCTCGAGCCACCTC 42875 ||||| || ||||| || ||| ||||| ||| Sbjct 415956 CCGACTTCGCTTGCCTGCTTTTC---AGCCATCTC 415987 >seq2043 Length=178294 Score = 102 bits (112), Expect = 2e-16 Identities = 309/474 (65%), Gaps = 24/474 (5%) Strand=Plus/Plus Query 244334 GGGCTGCCCTCGTAGGTCGGGTAGGGACCGTCGCGCTGGGCCAGCTTACAGCTCTCGTCG 244393 || ||||| ||||| ||| ||| | || || || |||| | ||||| | ||| Sbjct 126369 GGACTGCCTTCGTACGTCTCGTAAGCTCCTTCCTTCTCCGCCATTTCGCAGCTAGCCTCG 126428 Query 244394 AGGGCGGCGTAGTAGATGGTCTCGAAGATCATCTTGTTCATGTCGCGGGCCTTGCCGCAG 244453 || |||| | ||||| ||||| ||||| || ||||| || | ||| | | Sbjct 126429 AGACCGGCATGATAGATAGTCTCAAAGATTTGCTGGTTCAACTCTCTGGCAGCGGGCGAA 126488 Query 244454 GTGAAGGGGATGCCCATCATCATGAAGACGTCGGCCAGTCCCTGCACGCCGATGCCGATG 244513 |||||||||||| | |||||| |||| || || || ||||| || ||||||||| Sbjct 126489 TCGAAGGGGATGCCGAGAGCCATGAACGCGTCAGCGAGGCCTTGCACACCAATGCCGATG 126548 Query 244514 GGTCTGTGTCGCTTGTTGGAGCGCATG-GCTTCGGGCACGGGGTAAAAGTTGCCGTCGAT 244572 || | ||| ||| |||| || | | | || ||||| ||||| || ||||| |||||| Sbjct 126549 GGACGGTGGCGCATGTTCGA-CTTACGCGCCTCGGGTACGGGATAGTAGTTGATGTCGAT 126607 Query 244573 CACCTTGTTGAGGTTGCGGGTGATCATGCGGACGACGTCGGCCAGCAGCTGAAAGTCGTA 244632 | |||||||||| | || | | |||||||| | | ||| ||| Sbjct 126608 GATACGGTTGAGGTTGAACGCGACGACTTTGGCGACGTCGTGTAACTTCTGGAAG----- 126662 Query 244633 CTCGTAGGGATCCTCGGCGATGGTGATCCTCACAAACTCGTTGAGGGCGACGCTGGCCAG 244692 | ||| | | ||| || |||| ||| || ||| |||| | || || Sbjct 126663 -TTGTATGTACCCTTGGAGATG-----------AAAGACG-GGAGTGCGAGGGACGCTAG 126709 Query 244693 GTTGCAGACGGCCACCTCCTCCGAGTTGGTGTACTGGACAATCTCGGTGCAGAGGTTACT 244752 |||||| || || ||| |||| || ||||| || ||||| ||||| || || Sbjct 126710 GTTGCAAACAGCAGTCTCGTCCGGCGAGGAGTACTCGATGATCTCCGTGCAAAGATTGGA 126769 Query 244753 GCACTTGATGGTGCCCAGGTGCTGGTGATTGGACTTG---GCGTTGCAGGCGTC 244803 | ||||||||||||| || | ||| || || || ||| ||| ||| |||||| Sbjct 126770 GGACTTGATGGTGCCGAGATTCTGTTGGTTAGATTTGCCTGCGATGC-GGCGTC 126822 Score = 89.7 bits (98), Expect = 1e-12 Identities = 122/167 (73%), Gaps = 10/167 (6%) Strand=Plus/Plus Query 245077 GTTCTTCCTCAGCTCCAAAAAGTCAAAGACGTCGACGTGCCAGGGCTCCATGTAGACAGC 245136 ||||||||||| || | |||||| ||||| ||| ||||||| ||||| | ||||| ||| Sbjct 127193 GTTCTTCCTCAAGTCGAGAAAGTCGAAGACATCGGCGTGCCATGGCTCGAGGTAGATAGC 127252 Query 245137 GAGGGCGCCGGGCCGCTTGTTGCCTCCCTGGTCCACCATCCTCTCGAGCGCGTTG-AAGA 245195 | ||||| || |||||||| ||||| |||| || | | |||||| || | | | Sbjct 127253 AAATGCGCCAGGGCGCTTGTTACCTCCTTGGT----CAACATATCGAGC-TGTGGCATCA 127307 Query 245196 TGCGC----AGGGTAGGCACTATGCCGTTAGAGTGGCCGTTGGTGCC 245238 | ||| || | || || |||||||| || | ||||||||||| Sbjct 127308 TACGCCCGAAGCATTGGTACAATGCCGTTCGAATAACCGTTGGTGCC 127354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 944309347077040