Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_009333.1 Length=137969 Score E Sequences producing significant alignments: (Bits) Value seq2452 87.8 2e-12 >seq2452 Length=1029860 Score = 87.8 bits (96), Expect = 2e-12 Identities = 232/350 (66%), Gaps = 11/350 (3%) Strand=Plus/Minus Query 20414 GGGTTCCACGCACACATAATGATTCTTCTATC-GTGCGGATTATTTTTTAT----TAAAT 20468 || ||||| ||| ||||||||| || | ||| ||| ||||| | || || | || Sbjct 614460 GGATTCCATGCAGTCATAATGATCCTGCGATCAGTG-GGATTGTGCTTGATCTTGTCGAT 614402 Query 20469 CCACAATGTACGACAATTGGTCAAACCCCTGGCCTGTATAGTCAGCATCCGCGTCCACGT 20528 ||| | | ||| || |||| || || || ||||| || || || ||| | Sbjct 614401 GCAC----TCCTTCAACTGATCAACTCCTTGACCCGTATAATCCGCTTCGCAGTCAGTAT 614346 Query 20529 ACGCCGCCCCAAAGTGCCTCCACTGGAAACCGTAAACAGGTCCCAAATCCCCCTCCCTTC 20588 | ||||||||||||| ||||| || || || || ||||| || | ||||| || | | Sbjct 614345 AATCCGCCCCAAAGTGTCTCCATTGAAATCCATATACAGGACCAAGGTCCCCTTCGCGAC 614286 Query 20589 TGTGCGCCAGGCCGCGCCCGGCCAGGAACTCCCTGGAGCCATTTTTGTCCCATATCTTGA 20648 || |||| ||| | | | | ||||||| | || ||||| ||||||||||||| Sbjct 614285 GATGGGCCAAGCCTCTACTCTCTAAGAACTCCTTCGACCCATTCCCATCCCATATCTTGA 614226 Query 20649 CTCCTGTTCTTGAAAGCTCCCTGGAGTCAGTACTCCCCTTCAGAAACCAAAGCAGCTCTT 20708 ||| | ||| ||| | | |||||||| || | | ||||| | ||||||| Sbjct 614225 TGCCTTTCTTTGCGAGCAACGTTGAGTCAGTTGAGCCATGGATGAACCATATAAGCTCTT 614166 Query 20709 GCACTACGCCTCGCCAAAACACCCGCTTTGTGGTTAGTAAGGGAA-AGTG 20757 || | ||||| || ||||||||||| ||||| |||| |||| Sbjct 614165 CGACAATTCCTCGAAGGAATGTACGCTTTGTGGTAAGTAATGGAAGAGTG 614116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 441358847102360