Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_009898.1 Length=368683 Score E Sequences producing significant alignments: (Bits) Value seq2481 136 9e-27 seq1750 127 5e-24 seq2476 98.7 2e-15 >seq2481 Length=1366164 Score = 136 bits (150), Expect = 9e-27 Identities = 170/232 (73%), Gaps = 1/232 (0%) Strand=Plus/Plus Query 288242 CATGTCCACCGCGGAGTCTAAGTACGAGATGAATCGTGCTTTCTTTTTGGATATTATAGT 288301 |||| || |||||||| | || || || || | || || || ||||| || || | Sbjct 516597 CATG-CCTCCGCGGAGACGGAGAACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAAT 516655 Query 288302 CGGCGAGCGTGCGTCCGTCTTCTAATTGTTTTCCTGCGAAGATCAGACGCTGTTGAGAAT 288361 | | || ||||| || ||||| | ||| || || |||||||| || ||||||||| Sbjct 516656 CAGAAAGAGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGTTGATCGG 516715 Query 288362 CTGGGATTCCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATT 288421 || |||||||| || ||||| || || ||||||||||| || || | ||| || | Sbjct 516716 GAGGAATTCCTTCCTTGTCCTGAATCTTGGCTTTCACGTTATCGATGGTGTCGGAGGACT 516775 Query 288422 CTACTTCGAGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 | || ||||| ||||||||||| || |||| |||||| ||||| |||||||| Sbjct 516776 CGACCTCGAGAGTGATCGTCTTGCCAGTCAAAGTCTTCACGAAGATCTGCAT 516827 Score = 91.5 bits (100), Expect = 3e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 ||||| || ||||| || || || |||||||| || || | || || || |||||| Sbjct 517000 CCTTCCTTGTCCTGAATCTTAGCCTTCACGTTGTCAATCGTGTCAGAGGACTCGACTTCG 517059 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCATT 288474 || || |||||||| || || |||||||||||||||||||||||| Sbjct 517060 AGGGTAATCGTCTTTCCTGTAAGAGTCTTGACGAATATCTGCATT 517104 >seq1750 Length=1054334 Score = 127 bits (140), Expect = 5e-24 Identities = 130/170 (76%), Gaps = 0/170 (0%) Strand=Plus/Plus Query 269152 ATCGGTATGAATGCCGATCTCATGAATCAATATATCGAATTCGTGGCTGATCGTATCTTC 269211 ||||| ||||| || | |||||| || || || |||||||||||||||||| || | Sbjct 416136 ATCGGCATGAACGCGAAGCTCATGTGCCAGTACATTGAATTCGTGGCTGATCGTCTCCTT 416195 Query 269212 ACGGCACTCGGTTATGAGAAAGTGTACAATTCGAAGAATCCCTTCGCCTTTATGGAACTA 269271 | || || | || || ||||||||||||| ||||||||||| ||| ||||| | Sbjct 416196 GTATCCCTTGGCAACGACAAGGTGTACAATTCGACGAATCCCTTCGACTTCATGGACATG 416255 Query 269272 ATTTCGCTCGAAGGAAAGACGAACTTCTTCGAAAAGCGTGTCAGCGACTA 269321 || ||||| | || ||||||||||||||||||||||| ||| ||||| Sbjct 416256 ATCTCGCTGCAGGGCAAGACGAACTTCTTCGAAAAGCGCGTCTCTGACTA 416305 >seq2476 Length=877278 Score = 98.7 bits (108), Expect = 2e-15 Identities = 84/104 (81%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 288370 CCTTCTTTATCCTGGATTTTCGCTTTCACGTTTTCTATAGAATCGCTCGATTCTACTTCG 288429 ||||| || |||||||| ||||| || ||||| || || | |||| || || || || Sbjct 850834 CCTTCCTTGTCCTGGATCTTCGCCTTTACGTTGTCGATCGTATCGGAGGACTCGACCTCA 850775 Query 288430 AGCGTGATCGTCTTCCCGGTCAGAGTCTTGACGAATATCTGCAT 288473 || ||||| |||||||||||||| ||||||||||| |||||||| Sbjct 850774 AGGGTGATGGTCTTCCCGGTCAGCGTCTTGACGAAGATCTGCAT 850731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1179616175879662