Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_009899.1 Length=344691 Score E Sequences producing significant alignments: (Bits) Value seq1750 111 3e-19 seq2248 84.2 5e-11 >seq1750 Length=1054334 Score = 111 bits (122), Expect = 3e-19 Identities = 139/191 (73%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 243544 GACGCTATTCCATGCCGGCTTATTGGCATGAACTCTGAACTCATGGGACAGTACATCGAA 243603 |||||| |||| | ||| || ||||||||| | | |||||| | |||||||| ||| Sbjct 416115 GACGCTCTTCCCGTCTCGCTCATCGGCATGAACGCGAAGCTCATGTGCCAGTACATTGAA 416174 Query 243604 TTCGTAGCCGACCGCATTTTCATCGCGCTTGGTTATGAGAAAGTGTACAACTCCAAGAAC 243663 ||||| || || || | | | | ||||| | || || |||||||| || | ||| Sbjct 416175 TTCGTGGCTGATCGTCTCCTTGTATCCCTTGGCAACGACAAGGTGTACAATTCGACGAAT 416234 Query 243664 CCCTTTGCCTTTATGGAGCTCATTTCGCTTCAAGGGAAAACTAACTTCTTCGAAAAGCGT 243723 ||||| | ||| ||||| | || ||||| || || || || ||||||||||||||||| Sbjct 416235 CCCTTCGACTTCATGGACATGATCTCGCTGCAGGGCAAGACGAACTTCTTCGAAAAGCGC 416294 Query 243724 GTCAGTGATTA 243734 ||| ||| || Sbjct 416295 GTCTCTGACTA 416305 >seq2248 Length=795099 Score = 84.2 bits (92), Expect = 5e-11 Identities = 116/160 (73%), Gaps = 2/160 (1%) Strand=Plus/Minus Query 298291 GATTTCTTCGTTCTTCGTGATGCTTGCCACGGAT-GCATCGCGGACATTCAATAGTTTTC 298349 ||| || ||||||||| |||| || | || | | || || || ||||| | || ||| | Sbjct 661132 GATCTCCTCGTTCTTCATGAT-CTGGTCATGCCTCGCCTCCCGTACATTGAGTAATTTAC 661074 Query 298350 CACGAAGAGGGAACACTCCATATCTCTCGCGACCGACCACGGACAGCCCTGCGATTGCAA 298409 | ||||||||||| || ||| | | |||||||| || |||| || || |||| ||| | Sbjct 661073 CTCGAAGAGGGAAGACGCCAAAGTTGTCGCGACCAACAACGGCCAAACCAGCGACTGCCA 661014 Query 298410 GTGTCGCTGCGGAATCCCCCTCCGTCAGAATGAGAGTGCA 298449 | | ||||| || || || || || ||||||||||| Sbjct 661013 GGGATTTGGCGGAGTCACCTTCGGTAAGGATGAGAGTGCA 660974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1102844263586150