Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq1750 131 2e-25 seq2248 91.5 2e-13 >seq1750 Length=1054334 Score = 131 bits (144), Expect = 2e-25 Identities = 167/227 (74%), Gaps = 6/227 (3%) Strand=Plus/Minus Query 126065 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCATGAGACCCCGCTTC 126124 ||||||||||| |||||| || || ||||| || || ||||| ||||| |||||| Sbjct 415947 CCCTCGTCACGACTGATGAGCTCGTTGGAGAAAGTAAGACCAGGCATAAGACCGCGCTTC 415888 Query 126125 TTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTCCACACACGCGAAC 126184 ||||||||||| || | |||||||| ||||||||||| ||||| ||| ||||| Sbjct 415887 TTCAACCAGAAGATAGAGGCGAATGAACCTGAGAAGAAGATACCCTCGACAGCGGCGAAG 415828 Query 126185 GCAAAGAGACGCTCAGCAAAGGAGCGCGACT--TTGTGTCAAA-CCACTTCATCGCCCAC 126241 |||| ||||||||||||||| | ||| | | || | ||| ||| | |||||| Sbjct 415827 GCAACGAGACGCTCAGCAAATG---TCGATTGCTGGTCTGAAATCCATCGAAGAGCCCAC 415771 Query 126242 TGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 126288 | ||||| || |||||| |||| || | ||| || |||||||| Sbjct 415770 TCGGCCTTGCGCTTGATACAGGGGATAGTTTCGATAGCGTCAAAGAG 415724 >seq2248 Length=795099 Score = 91.5 bits (100), Expect = 2e-13 Identities = 177/260 (68%), Gaps = 10/260 (4%) Strand=Plus/Minus Query 172651 ATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGATACTCCTTACC 172710 ||| ||||| ||||| | ||||| || | || ||| || | |||||||||| Sbjct 661225 ATCTGTCATGATCATCAATCGACCGTATCTCAGGCTGGAGACGTTGGTATACTCCTTATT 661166 Query 172711 CTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTT-----TGATGTGAGT 172765 ||||| ||||||| ||||||||||| | | || ||| | ||| |||| || || Sbjct 661165 GTGTTGTAGACCCATGATCTTCTTGATGTTTTGGATCTCCTCGTTCTTCATGATCTG-GT 661107 Query 172766 TGCGCCACTGAAGCATCGCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGTAG 172825 ||| | || || || ||||| | || || || |||||||| || || || Sbjct 661106 CATGCCTC----GCCTCCCGTACATTGAGTAATTTACCTCGAAGAGGGAAGACGCCAAAG 661051 Query 172826 TGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCC 172885 | || |||||||| || | | |||||| ||||| |||| || ||||| ||||| || Sbjct 661050 TTGTCGCGACCAACAACGGCCAAACCAGCGACTGCCAGGGATTTGGCGGAGTCACCTTCG 660991 Query 172886 GTCACGATGAGCGTACACTT 172905 || | |||||| || || || Sbjct 660990 GTAAGGATGAGAGTGCATTT 660971 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597334716159320