Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq2467 107 2e-18 seq2481 102 8e-17 seq2476 95.1 1e-14 seq2043 86.0 6e-12 seq2407 82.4 8e-11 >seq2467 Length=211848 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 |||||||| | | | || ||||| | ||| || || || || |||||||| || | | Sbjct 155868 CCGCCGCGAAGACGCAAGACAAGATGGAGCGTTGACTCCTTCTGGATGTTGTAGTCCGAG 155809 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | |||||| |||| || ||||||||||||||| | ||||| ||||| || |||||||| Sbjct 155808 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGATCGGGAGGG 155749 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || || |||||| || | || || || || || Sbjct 155748 ATGCCCTCCTTGTCCTGGATCTTCGCCTTTACGTTGTCGATCGTGTCGGAGGACTCGACC 155689 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| || | || || ||||| || ||||| Sbjct 155688 TCCAGGGTGATGGTCTTGCCAGTAAGCGTCTTCACGAAGATCTGCAT 155642 >seq2481 Length=1366164 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 64247 GTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGCTTGCCG 64306 || || || || || ||||||||||| | | ||||| | ||||| || ||||||||| Sbjct 516631 GTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCGAGTTGCTTGCCG 516690 Query 64307 GCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTTTGCTTT 64366 || | || || ||||| || ||||||||||||||||| || || || | | || ||||| Sbjct 516691 GCGAAGATAAGGCGCTGTTGATCGGGAGGAATTCCTTCCTTGTCCTG-AATCTTGGCTTT 516749 Query 64367 -ACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTCAAAGT 64425 || || | || || || || || || | ||| | |||||||| |||||||| Sbjct 516750 CACGTTATCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATCGTCTTGCCAGTCAAAGT 516809 Query 64426 TTTTACGAAAATTTGCAT 64443 || ||||| || ||||| Sbjct 516810 CTTCACGAAGATCTGCAT 516827 Score = 86.0 bits (94), Expect = 6e-12 Identities = 83/107 (78%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || ||||| | || ||||| || || ||||||||||| | || |||||| | || Sbjct 516844 AGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCCGAGAGGGTGCGACCATCC 516903 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAAT 64338 |||||||||||||| || | ||||| ||||| |||||||| || || Sbjct 516904 TCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGTTGGTCGGGTGGGAT 516950 Score = 82.4 bits (90), Expect = 8e-11 Identities = 110/153 (72%), Gaps = 0/153 (0%) Strand=Plus/Plus Query 64216 ACCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 ||| || |||| | ||| || ||||||| || ||||| || |||||||| || || | Sbjct 516372 ACCACCACGCAGACGAAGGACGAGATGAAGAGTAGATTCCTTCTGAATGTTATAGTCCGA 516431 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | ||||| | || || | |||||| || || |||| | || || ||||| || || Sbjct 516432 CAATGTGCGACCATCCTCCAACTGCTTTCCAGCGAAAATCAAACGTTGTTGGTCAGGTGG 516491 Query 64336 AATTCCTTCTTTTTCTTGTATTTTTTGCTTTAC 64368 ||||||||| || ||||| || ||| ||| || Sbjct 516492 AATTCCTTCCTTGTCTTGGATCTTTGCCTTAAC 516524 >seq2476 Length=877278 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATCTAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCG 64276 |||||||| | | || || || || | |||||| || || || |||||||| || | Sbjct 851248 CCGCCGCGAAGACGCAGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCAGAA 851189 Query 64277 ACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGA 64336 | ||||| |||| || || ||||||||||| | ||||| ||||| ||||||||||| Sbjct 851188 AGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGAGGG 851129 Query 64337 ATTCCTTCTTTTTCTTGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACT 64396 || || || || || || || || ||| || || | || || | || || Sbjct 851128 ATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTATCGATGGTGTCCGATGATTCGACC 851069 Query 64397 TCTACAGTTACGGTCTTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || | || | ||||||||| |||| || || ||||| || ||||| Sbjct 851068 TCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTAACGAAGATCTGCAT 851022 Score = 91.5 bits (100), Expect = 1e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Minus Query 64231 AAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTC 64290 ||| || || || | || ||||| || || ||||| || || | || ||| || |||| Sbjct 851006 AAGGACGAGGTGTAGAGTGGATTCCTTCTGGATGTTATAGTCCGAGAGGGTACGTCCGTC 850947 Query 64291 TTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAAT 64338 ||||||||||||||||| ||||||| || ||||||||||||||||| Sbjct 850946 CTCAAGCTGCTTGCCGGCGAAAATGAGACGTTGCTGGTCGGGAGGAAT 850899 >seq2043 Length=178294 Score = 86.0 bits (94), Expect = 6e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Plus Query 155354 GTTGTAAGTTTCGATGGCGGCGTCAATGTCACGACCGTGTATACCGATCGCCACGCGCAT 155413 |||||| || |||||| || ||| || ||| |||||||| |||| ||||| ||||| Sbjct 127622 GTTGTATGTCTCGATGACGCGGTCGATATCAGCTCCGTGTATGCCGACAGCCACACGCAT 127681 Query 155414 CAGCATGTGTTGAATGCGCTCCGCAACGCGGCCGTTGATGCG 155455 | ||| ||||| ||||||||||||||| || |||||||| Sbjct 127682 GATCATATGTTGTGGGCGCTCCGCAACGCGTCCATTGATGCG 127723 >seq2407 Length=893 Score = 82.4 bits (90), Expect = 8e-11 Identities = 97/129 (75%), Gaps = 2/129 (2%) Strand=Plus/Minus Query 64217 CCGCCGCGCAATC-TAAGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGC 64275 |||||||| | | |||| || ||||| | | || | || || |||||||| || || | Sbjct 174 CCGCCGCGAAGACGTAAG-ACAAGATGGAGCATCAACTCCTTCTGAATGTTTTAGTCAGA 116 Query 64276 GACGGTGCGCGCGTCTTCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGG 64335 | |||||| | ||||| || ||||||||||| | ||||| ||||| ||||||||||| Sbjct 115 AAGAGTGCGCCCATCTTCGAGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCGGGAGG 56 Query 64336 AATTCCTTC 64344 || || || Sbjct 55 GATGCCCTC 47 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499629004978760