Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_011345.1 Length=155122 Score E Sequences producing significant alignments: (Bits) Value seq2467 109 5e-19 seq2476 104 2e-17 seq190 104 2e-17 >seq2467 Length=211848 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | |||||| || | ||| | |||||||||| || ||||||||||| Sbjct 155868 CCGCCGCGAAGACGCAAGACAAGATGGAGCGTTGACTCCTTCTGGATGTTGTAGTCCGAG 155809 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | || || ||||||||| || || |||| | |||| || |||||||| || ||||| Sbjct 155808 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGATCGGGAGGG 155749 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTGTTTTAATTGTTCCACGGTGTCGGTCGACTCCACC 138567 || || || ||||| ||| || |||| | || | ||||||| ||||| ||| Sbjct 155748 ATGCCCTCCTTGTCCTGGATCTTCGCCTTTACGTTGTCGATCGTGTCGGAGGACTCGACC 155689 Query 138568 TCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 || | || | || || ||||| || || || || || ||||||||| Sbjct 155688 TCCAGGGTGATGGTCTTGCCAGTAAGCGTCTTCACGAAGATCTGCATG 155641 >seq2476 Length=877278 Score = 104 bits (114), Expect = 2e-17 Identities = 162/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 138388 CCGCCTCGCAAACGCAAAACTAAATGTATGTTTGACTCCTTTTGAATGTTGTAGTCGCTC 138447 ||||| || | ||||| || | || | | |||||||| || ||||||||||| Sbjct 851248 CCGCCGCGAAGACGCAGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCAGAA 851189 Query 138448 ATAGTACGCGAGTCCTCGAGTTGTTTACCGGAATAGATTAGACGCTGTTGGTCCGGAGGT 138507 | ||| || |||||||||||| || |||| |||| || ||||||||||| ||||| Sbjct 851188 AGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGAGGG 851129 Query 138508 ATACCTTCTTTGTCGGTGATTTTTTG-TTTTAATTGTTCCACGGTGTCGGTCGACTCCAC 138566 || || || ||||| ||| | || | || | | || | |||||| | || || || Sbjct 851128 ATGCCCTCCTTGTC-CTGAATCTTCGCCTTGACGTTATCGATGGTGTCCGATGATTCGAC 851070 Query 138567 CTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTTACAAAAATCTGCATG 138615 ||||| || | || || |||||||| || || || || ||||||||| Sbjct 851069 CTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTAACGAAGATCTGCATG 851021 >seq190 Length=61660 Score = 104 bits (114), Expect = 2e-17 Identities = 142/196 (72%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 138421 GACTCCTTTTGAATGTTGTAGTCGCTCATAGTACGCGAGTCCTCGAGTTGTTTACCGGAA 138480 |||||||| ||||| |||||||| | |||||| |||||||||||||| |||| Sbjct 9979 GACTCCTTCTGAATATTGTAGTCAGAAAGAGTACGGCCATCCTCGAGTTGTTTGCCGGCG 10038 Query 138481 TAGATTAGACGCTGTTGGTCCGGAGGTATACCTTCTTTGTCGGTGATTTTTTG-TTTTAA 138539 |||| |||||||| |||| ||||| ||||| || ||||| ||| | || | || | Sbjct 10039 AAGATGAGACGCTGCTGGTTGGGAGGGATACCCTCCTTGTC-CTGAATCTTCGCCTTGAC 10097 Query 138540 TTGTTCCACGGTGTCGGTCGACTCCACCTCGACCGTCAGCGTTTTACCAGTCAGAGTTTT 138599 | || | |||||| | ||||| || |||| || | || || ||||| || || || Sbjct 10098 ATTATCGATGGTGTCCGAGGACTCAACTTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTT 10157 Query 138600 TACAAAAATCTGCATG 138615 || || ||||||||| Sbjct 10158 CACGAAGATCTGCATG 10173 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 496246711904880