Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq190 116 4e-21 seq2467 109 5e-19 seq2476 105 6e-18 seq2481 98.7 9e-16 seq2468 89.7 5e-13 >seq190 Length=61660 Score = 116 bits (128), Expect = 4e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 126886 TCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCC 126945 ||||||||| | || | || | ||| | ||| ||||| || ||||||||||| || Sbjct 9945 TCCACCGCGAAGACGGAGGACAAGATGGAGCGTCGACTCCTTCTGAATATTGTAGTCAGA 10004 Query 126946 CATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGG 127005 | || || ||| || || ||||| || ||| |||| | |||||||| | |||||| Sbjct 10005 AAGAGTACGGCCATCCTCGAGTTGTTTGCCGGCGAAGATGAGACGCTGCTGGTTGGGAGG 10064 Query 127006 TATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGAC 127065 || |||||||||||| || ||| ||||| | |||| |||||||| ||| || Sbjct 10065 GATACCCTCCTTGTCCTGAATCTTCGCCTTGACATTATCGATGGTGTCCGAGGACTCAAC 10124 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 ||||| || | || ||||| || || || || || || ||||||||| Sbjct 10125 TTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCATG 10173 >seq2467 Length=211848 Score = 109 bits (120), Expect = 5e-19 Identities = 163/229 (71%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | ||||| || | ||| | ||| ||||| || || || ||||| || Sbjct 155868 CCGCCGCGAAGACGCAAGACAAGATGGAGCGTTGACTCCTTCTGGATGTTGTAGTCCGAG 155809 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || ||||| || || || |||| | ||||| ||||||||||| Sbjct 155808 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGATCGGGAGGG 155749 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065 ||||||||||||||| ||| ||| ||| | |||| |||| ||||| | |||||| Sbjct 155748 ATGCCCTCCTTGTCCTGGATCTTCGCCTTTACGTTG-TCGATCGTGTCGGAGGACTCGAC 155690 Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 || | ||| | || ||||| || || || || || || ||||||||| Sbjct 155689 CTCCAGGGTGATGGTCTTGCCAGTAAGCGTCTTCACGAAGATCTGCATG 155641 >seq2476 Length=877278 Score = 105 bits (116), Expect = 6e-18 Identities = 160/228 (70%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946 || ||||| | |||| || | || | ||| ||||| || || || ||||| || Sbjct 851248 CCGCCGCGAAGACGCAGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCAGAA 851189 Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006 | ||||| || || || || || || ||| |||| | ||||| || |||||||| Sbjct 851188 AGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGAGGG 851129 Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACT 127066 ||||||||||||||| || ||| ||||| | |||| |||||||| ||||| Sbjct 851128 ATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTTATCGATGGTGTCCGATGATTCGACC 851069 Query 127067 TCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 |||| ||| | || ||||| ||||| || || || || ||||||||| Sbjct 851068 TCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTAACGAAGATCTGCATG 851021 >seq2481 Length=1366164 Score = 98.7 bits (108), Expect = 9e-16 Identities = 142/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 |||||||| || || || |||||||| | ||||| ||| || || || || || Sbjct 516631 GTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCGAGTTGCTTGCCG 516690 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGC-TT 127035 ||| |||| | ||||| ||||||||||| || || ||||||||| ||| | | || || Sbjct 516691 GCGAAGATAAGGCGCTGTTGATCGGGAGGAATTCCTTCCTTGTCC-TGAATCTTGGCTTT 516749 Query 127036 GAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095 | | |||| |||||| | |||||| |||| || | ||| ||||| |||| ||| Sbjct 516750 CACGTTATCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATCGTCTTGCCAGTCAAAGT 516809 Query 127096 TTTTACAAAAATCTGCAT 127113 || || || |||||||| Sbjct 516810 CTTCACGAAGATCTGCAT 516827 >seq2468 Length=587188 Score = 89.7 bits (98), Expect = 5e-13 Identities = 96/127 (76%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 126884 GCTCCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCG 126943 || ||||| || | || | |||||| || | || ||||| || ||||| ||||| ||| Sbjct 315061 GCACCACCACGGAGGCGGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCG 315120 Query 126944 CCCATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGA 127003 | || ||||| ||| || |||||||| |||||| |||| | |||||||||||||| Sbjct 315121 CTCAAGGTGCGGCCATCCTCGAGCTGTTTGCCAGCGAAGATGAGGCGCTGCTGATCGGGG 315180 Query 127004 GGTATGC 127010 || |||| Sbjct 315181 GGAATGC 315187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475485768230960