Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq2481 113 4e-20 >seq2481 Length=1366164 Score = 113 bits (124), Expect = 4e-20 Identities = 155/212 (73%), Gaps = 6/212 (3%) Strand=Plus/Plus Query 45132 ACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA--ATCGT 45189 || ||||| || || |||||||| || || ||||| || ||| | | || ||| | Sbjct 516391 ACGAGATGAAGAGTAGATTCCTTCTGAATGTTATAGTCC--GACAATGTGCGACCATCCT 516448 Query 45190 CCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTATCTT 45249 |||| || ||||| ||| | ||||| ||||| ||||| || ||||| ||||| || |||| Sbjct 516449 CCAACTGCTTTCCAGCGAAAATCAAACGTTGTTGGTCAGGTGGAATTCCTTCCTTGTCTT 516508 Query 45250 GAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACCGTT 45308 | || ||| || | || | || | |||||||||||||| || ||||| || | || Sbjct 516509 GGATCTTTGCCTTAA-CGTTGTCGATTGTGTCGGAAGACTCAACCTCGAGGGTGATAGTC 516567 Query 45309 TTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || ||||| || || || ||||| || ||||| Sbjct 516568 TTTCCGGTGAGGGTCTTGACAAAGATCTGCAT 516599 Score = 95.1 bits (104), Expect = 1e-14 Identities = 161/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 || ||||||||||| | | || || || || || || ||||| ||||| || ||||| Sbjct 516598 ATGCCTCCGCGGAGACGGAGAACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCA 516657 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 | || ||| || | ||| || || ||| | || | || || || || || Sbjct 516658 GAAAGAGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGTTGATCGGGA 516717 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTC 45289 ||||| ||||| || || ||||| || ||| | || | || | ||||||||| ||||| Sbjct 516718 GGAATTCCTTCCTTGTCCTGAATCTTGGCTTTCA-CGTTATCGATGGTGTCGGAGGACTC 516776 Query 45290 GACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||| |||||||| | ||| ||||| || | ||| || || || || ||||| Sbjct 516777 GACCTCGAGAGTGATCGTCTTGCCAGTCAAAGTCTTCACGAAGATCTGCAT 516827 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451988911048840