Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_013772.1 Length=176677 Score E Sequences producing significant alignments: (Bits) Value seq2467 156 5e-33 seq2476 149 7e-31 seq190 107 2e-18 seq2481 104 3e-17 seq2407 87.8 2e-12 seq347 82.4 9e-11 >seq2467 Length=211848 Score = 156 bits (172), Expect = 5e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 46378 ACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTC 46437 |||||| || ||||| | || |||||| ||||| |||||||| || || ||||| | Sbjct 155857 ACGCAAGACAAGATGGAGCGTTGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCC 155798 Query 46438 GTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTT 46497 ||| ||||||||||||||||| || || | |||||| || |||| || | || |||||| Sbjct 155797 GTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGATCGGGAGGGATGCCCTCCTT 155738 Query 46498 GTCCATGATCTTCTTCTTGAGCGTCG-CCACCGTGTCGCTCGATTCCACATCCACCGTGA 46556 |||| ||||||| ||| | ||| | | | ||||||| || || || |||| |||| Sbjct 155737 GTCCTGGATCTTCGCCTTTA-CGTTGTCGATCGTGTCGGAGGACTCGACCTCCAGGGTGA 155679 Query 46557 TGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCATTTTGCACAAAC 46604 |||| ||||| || ||||| || || ||||| ||||| |||| |||| Sbjct 155678 TGGTCTTGCCAGTAAGCGTCTTCACGAAGATCTGCATGCTGCAGAAAC 155631 >seq2476 Length=877278 Score = 149 bits (164), Expect = 7e-31 Identities = 148/192 (77%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| |||||||| || |||||||| |||| ||||| |||||||||||||| Sbjct 851213 CTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAA 851154 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||| ||||||| || | || |||||||||| |||||| ||||| | Sbjct 851153 GATGAGGCGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTGACGTT 851094 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| ||||| || || | |||||||| ||||| |||||||| ||||| Sbjct 851093 ATCGATGGTGTCCGATGATTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTTAAC 851034 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 851033 GAAGATCTGCAT 851022 >seq190 Length=61660 Score = 107 bits (118), Expect = 2e-18 Identities = 139/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || ||||||||||| || ||||| || | || ||||| || ||||||||||| Sbjct 9981 CTCCTTCTGAATATTGTAGTCAGAAAGAGTACGGCCATCCTCGAGTTGTTTGCCGGCGAA 10040 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 || | |||||||||| || || | | |||||||||| |||||| ||||| | Sbjct 10041 GATGAGACGCTGCTGGTTGGGAGGGATACCCTCCTTGTCCTGAATCTTCGCCTTGACATT 10100 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| || || || || | |||||||| ||||| || || || || || Sbjct 10101 ATCGATGGTGTCCGAGGACTCAACTTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTCAC 10160 Query 46582 AAAGATTTGCAT 46593 ||||| ||||| Sbjct 10161 GAAGATCTGCAT 10172 Score = 96.9 bits (106), Expect = 4e-15 Identities = 83/103 (81%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||||||||| || | || |||||| ||||| ||||| ||||| || |||||| | Sbjct 10474 CGCAACACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTACTCGGAGAGGGTGCGCCCA 10533 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGG 46481 || |||||||||||||||||||| |||| ||| || ||||||| Sbjct 10534 TCTTCGAGCTGCTTGCCGGCGAAGATCAGGCGTTGTTGGTCGG 10576 >seq2481 Length=1366164 Score = 104 bits (114), Expect = 3e-17 Identities = 138/192 (72%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| ||||| ||||| || || || || | | || || | ||||||||| || || Sbjct 516180 CTCCTTCTGGATGTTGTAATCAGAGAGCGTCCTGCCATCCTCCAACTGCTTGCCAGCAAA 516239 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGT 46521 ||||||||||| ||||| | || | | |||||| ||| ||||| ||||| | Sbjct 516240 GATCAAGCGCTGTTGGTCAGGTGGGATCCCCTCCTTATCCTGAATCTTGGCCTTGACATT 516299 Query 46522 CGCCACCGTGTCGCTCGATTCCACATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAAC 46581 | | ||||| |||||| || || | |||||||| |||||||||| || || || Sbjct 516300 GTCGATGGTGTCTGACGATTCAACTTCGAGGGTGATGGTCTTGCCCGTCAAAGTCTTCAC 516359 Query 46582 AAAGATTTGCAT 46593 ||||||||||| Sbjct 516360 GAAGATTTGCAT 516371 Score = 98.7 bits (108), Expect = 1e-15 Identities = 159/229 (69%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 46365 TGCCTCCTCTTAAACGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGG 46424 ||||||| | | ||| | || || || | ||| |||||| ||||| ||||| || | Sbjct 516599 TGCCTCCGCGGAGACGGAGAACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCAG 516658 Query 46425 ATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGGCCG 46484 | |||||||| | || ||||| |||||||||||||| || | |||||| || |||| | Sbjct 516659 AAAGAGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGTTGATCGGGAG 516718 Query 46485 GCACGCTCTCCTTGTCCATGATCTTCTTCTTGAGCGTCGCCACCGTGTCGCTCGATTCCA 46544 | | | ||||||||| ||||| || | | | | |||||| || || | Sbjct 516719 GAATTCCTTCCTTGTCCTGAATCTTGGCTTTCACGTTATCGATGGTGTCGGAGGACTCGA 516778 Query 46545 CATCCACCGTGATGGTTTTGCCCGTCAGCGTTTTAACAAAGATTTGCAT 46593 | || | ||||| || ||||| |||| || || || ||||| ||||| Sbjct 516779 CCTCGAGAGTGATCGTCTTGCCAGTCAAAGTCTTCACGAAGATCTGCAT 516827 >seq2407 Length=893 Score = 87.8 bits (96), Expect = 2e-12 Identities = 86/110 (78%), Gaps = 2/110 (2%) Strand=Plus/Minus Query 46402 CTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAA 46461 |||||| || || || ||||| || ||||||||| | || ||||| |||||||||||||| Sbjct 139 CTCCTTCTGAATGTTTTAGTCAGAAAGAGTGCGCCCATCTTCGAGTTGCTTGCCGGCGAA 80 Query 46462 TATCAAGCGCTGCTGGTCGGCCGGCACGCTCTCCT--TGTCCATGATCTT 46509 || | ||||| ||||||| || | || ||||| ||||| |||||| Sbjct 79 GATGAGACGCTGTTGGTCGGGAGGGATGCCCTCCTAATGTCCTGGATCTT 30 >seq347 Length=645 Score = 82.4 bits (90), Expect = 9e-11 Identities = 80/103 (78%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 46379 CGCAACACCAGATGCAATGTACTCTCCTTTTGGATATTGTAGTCGGATAGAGTGCGCTCG 46438 |||||||||| || | ||| |||||| ||||| ||||||||||| || || ||| || Sbjct 285 CGCAACACCAAGTGAAGTGTCGACTCCTTCTGGATGTTGTAGTCGGAAAGGGTACGCCCG 226 Query 46439 TCGTCGAGCTGCTTGCCGGCGAATATCAAGCGCTGCTGGTCGG 46481 || || ||| ||| |||||| || |||| ||| || || |||| Sbjct 225 TCTTCCAGCCGCTGGCCGGCAAAGATCAGGCGTTGTTGATCGG 183 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 565220531401080