Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq2481 109 2e-18 >seq2481 Length=1366164 Score = 109 bits (120), Expect = 2e-18 Identities = 146/203 (72%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || || || || || || || || || ||||| || || || ||||| || || Sbjct 516599 ATGCAGATCTTTGTCAAGACCCTCACCGGAAAGACTATCACCCTCGAGGTTGAGTCTTCC 516540 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | || || |||| ||| || ||||| |||||||||||||| ||||| ||| Sbjct 516539 GACACAATCGACAACGTTAAGGCAAAGATCCAAGACAAGGAAGGAATTCCACCTGACCAA 516480 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||||| |||||| | || || || | || ||||| | || ||| |||| ||||| Sbjct 516479 CAACGTTTGATTTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACATTGTCGGACTATAAC 516420 Query 391230 ATTGATAAGGATGCAACACTTCA 391252 ||| | ||||| | || ||||| Sbjct 516419 ATTCAGAAGGAATCTACTCTTCA 516397 Score = 98.7 bits (108), Expect = 4e-15 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | || ||||| || || ||||||| || || || ||||| || || || || || Sbjct 516827 ATGCAGATCTTCGTGAAGACTTTGACTGGCAAGACGATCACTCTCGAGGTCGAGTCCTCC 516768 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 || | ||| || | ||| || ||||| || ||||||||||||||||| |||||| Sbjct 516767 GACACCATCGATAACGTGAAAGCCAAGATTCAGGACAAGGAAGGAATTCCTCCCGATCAA 516708 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 || || | || ||| | || || ||||| |||||||| | ||| | | ||||| || Sbjct 516707 CAGCGCCTTATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCACTCTTTCTGATTACAAC 516648 Query 391230 ATTGATAAGGATGCAACACTTCAC 391253 || | ||||| | || || ||| Sbjct 516647 ATCCAGAAGGAGTCTACTCTCCAC 516624 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975654381167132