Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_014765.1 Length=198519 Score E Sequences producing significant alignments: (Bits) Value seq1 282 5e-71 seq1731 123 3e-23 seq2454 91.5 2e-13 seq2476 86.0 8e-12 seq2248 82.4 1e-10 >seq1 Length=1328766 Score = 282 bits (312), Expect = 5e-71 Identities = 538/790 (68%), Gaps = 2/790 (0%) Strand=Plus/Minus Query 7021 GATGGCGGCTTGGACCGTCGCCCCGTATGCGACCGCCTCATCGGGGTTAATCGTTTTATT 7080 ||| || || ||||| | || ||||| ||||| |||||||||||||| || | || || Sbjct 1001849 GATAGCAGCCTGGACAGCGGCACCGTAAGCGACGGCCTCATCGGGGTTGATGCTCTTGTT 1001790 Query 7081 CAGTTCTTTACCGTTAAAATAATCCGATAACAT-TTGTTGAATTTTCGGGATTCGTGTCG 7139 | | || || ||||| || | || || | | ||| || | ||||| || || | Sbjct 1001789 CGGCTCCTTGCCGTTGAAGAAGTCAGACACGAGCTTGACGA-TACGGGGGATACGGGTGG 1001731 Query 7140 ATCCACCGACCAAAACGATTTCATTCACTTTCGATTTATCGATCTTTGAGTCTCGAAGTG 7199 | |||||||| | |||||||| | || || | || |||||||| || || || || Sbjct 1001730 AACCACCGACGAGGACGATTTCGTGGACGTTGGCCTTGTCGATCTTGGAATCGCGCAGAA 1001671 Query 7200 TTTTTTCGACAGGTTCCATACATTTACGGAACAAGTCCATACACAGTTCCTCAAAACGTG 7259 || || || || || | | ||||| | ||| || |||||||| ||||| | Sbjct 1001670 CCTTCTCCACGGGCTCGAGAGTAGAGCGGAAGAGATCCTGGCAAAGTTCCTCGAAACGAG 1001611 Query 7260 CACGGGTAATGGATGTATAGAAATCAACGCCGTCGTATAACGAATCAATTTCAATGGTTG 7319 ||||||| | ||| || ||||| || | || ||| | | || || ||||| |||| | Sbjct 1001610 CACGGGTGAGGGAGGTGTAGAAGTCGATACCCTCGAAGAGGGAGTCGATTTCGATGGAGG 1001551 Query 7320 TTTGTGCCGTCGAAGATAACGTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAA 7379 |||| | | || || | || ||||| || || || || || || || | |||||| | Sbjct 1001550 TTTGGGTGGCGGAGGAGAGGGTACGCTTGGCACGTTCGCAAGCGGTACGGAGACGACGGA 1001491 Query 7380 GGGCACGCGGGTTACCGGAAATATCTTTCTTATGTTTACGTTTAAACTCTTCAGAGAAGT 7439 | ||||| ||||| ||| | ||| ||||| || || || || ||||| | ||||| Sbjct 1001490 GAGCACGGGGGTTGGAGGAGAGATCCTTCTTGTGCTTGCGCTTGAACTCCTGGACGAAGT 1001431 Query 7440 GTCGAAGGAGTCTCGAATCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTT 7499 | | ||| | ||||||||||||||||| | || || || || || || || | Sbjct 1001430 GGTTGACGAGACGGTTGTCGAAATCTTCACCACCAAGATGAGTGTCACCAGCAGTGGCCT 1001371 Query 7500 TGACTTCAAAGATACCTCCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCA 7559 ||||||| |||||||| |||| ||| | | | || ||||| || || || ||||| | Sbjct 1001370 TGACTTCGAAGATACCCTCTTCGATGGTCAGGAGGGAGACATCGAAAGTTCCTCCACCGA 1001311 Query 7560 GGTCAAAAATGAGTACGTTCGTATCGTCGTCTTTGTTCTTATCGAGACCGTACGCGATAG 7619 | || || || || ||||| ||| | | ||||| || |||||||| ||||| | Sbjct 1001310 GATCGAAGATCAGGACGTTGCGCTCGCCAACGACCTTCTTGTCAAGACCGTAGGCGATGG 1001251 Query 7620 CCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCAT 7679 | || || || || || || |||||||| || ||| || || | || || | || | Sbjct 1001250 CAGCGGCGGTAGGCTCGTTGATAATACGGAGGACGTTAAGACCGGAGATGGTACCGGCGT 1001191 Query 7680 CTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCGGGACCGTTACGACCGCGTCCG 7739 | || || || ||||| || |||||||| |||||||| ||||| || || || |||| Sbjct 1001190 CCTTGGTGGCCTGTCGCTGAGAATCGTTGAAGTAGGCAGGGACAGTGACAACGGCGTTGT 1001131 Query 7740 TGACTTTCTTACCGAGATACGATTCCGCGATATCTTTCATTTTGGTAAGAACCATCGATG 7799 ||||| | | || | || | || || | || ||||| ||| | | ||||| || | Sbjct 1001130 TGACTGTTGTGCCCAAGTAGGCCTCAGCAGTCTCCTTCATCTTGTTCAAGACCATGGACG 1001071 Query 7800 AAATCTCTTC 7809 | || ||||| Sbjct 1001070 AGATTTCTTC 1001061 Score = 105 bits (116), Expect = 8e-18 Identities = 115/152 (76%), Gaps = 3/152 (2%) Strand=Plus/Minus Query 7964 GTGTTTTTGGGGTTCATGGCTGTTTGGTTCTTCGCCGCGTCCCCGATAAGACGTTCATTA 8023 ||||| | |||||||||||| || ||||| || || || ||||| |||||||| | Sbjct 1000797 GTGTTGTGGGGGTTCATGGCGACCTGATTCTTGGCGGCATCACCGATCAGACGTTCGGTG 1000738 Query 8024 TTTTCCGTAAACGCGACGTACGATGGGGTCGTTCGATTCCCTTGGTCGTTCGCAATAATT 8083 | ||| |||| ||| || || || |||||||| || || || || || || || || Sbjct 1000737 T---CCGAGAACGAGACATATGAGGGCGTCGTTCGGTTACCCTGATCATTGGCGATGATC 1000681 Query 8084 TCTACGCGGTCGTTTTGCCAGACGCCGACGCA 8115 || || ||||||||||||||||| |||||||| Sbjct 1000680 TCGACTCGGTCGTTTTGCCAGACACCGACGCA 1000649 >seq1731 Length=341791 Score = 123 bits (136), Expect = 3e-23 Identities = 264/388 (68%), Gaps = 10/388 (3%) Strand=Plus/Minus Query 7340 GTTCGCTTTGCGCGCTCACACGCCGTTCGTAAACGACGAAGGGCACGCGGGTTACCGGAA 7399 || ||||| || || |||||||| ||| || ||||| || ||||| | | | | | | Sbjct 95439 GTGCGCTTGGCACGTTCACACGCACTTCTCAAGCGACGGAGAGCACGAGCATCATCAGCA 95380 Query 7400 ATATCTTTCTTATGTTTACGT-TTAAACTCTTCAGAGAAGTGTCGAAG--GAGTCTCGAA 7456 || || |||| || | | | || ||||| | |||||| ||| ||| | | Sbjct 95379 ATGTCGAGCTTA-GTCTTCTTCTTGAACTCGTTCTTGAAGTGCTCAAGAAGAGCGTTG-- 95323 Query 7457 TCGAAATCTTCACCACCCAAGTGTGTATCCCCCGCGGTCGCTTTGACTTCAAAGATACCT 7516 ||||| || || ||||||||||| || || || || || || ||||| | |||| |||| Sbjct 95322 TCGAAGTCCTCTCCACCCAAGTGAGTGTCACCAGCAGTAGCCTTGACGGCGAAGACACCT 95263 Query 7517 CCTTCAATGTTTAACAACGAAACATCAAACGTACCACCACCCAGGTCAAAAATGAGTACG 7576 || ||||| | | || ||||| || || || ||||||| || || ||||| ||| Sbjct 95262 CCAGTGATGTTGAGGAGGGAGACATCGAAGGTTCCTCCACCCAAATCGAAGATGAGAACG 95203 Query 7577 TTCGTATCGTCGTCTTTG--TTCTTATCGAGACCGTACGCGATAGCCGCCGCCGTTGGTT 7634 ||| | || |||||| | | |||||||||||| || || || || || || || | Sbjct 95202 TTCTTCTC--CGTCTTCGATTGACGATCGAGACCGTAGGCAATGGCGGCAGCGGTGGGCT 95145 Query 7635 CATTAATAATACGAAGACAGTTCAGGCCAGCAATAGTTGCCGCATCTTTCGTCGCTTGTC 7694 |||| || ||||| ||| || || |||| || | | || || || || || | Sbjct 95144 CATTGATGATACGGAGAACGTCAAGACCAGAGATGGCACCAGCGTCCTTGGTAGCCAACC 95085 Query 7695 GTTGCGAATCGTTAAAGTAGGCCGGGAC 7722 |||| || || || ||||| || ||||| Sbjct 95084 GTTGGGAGTCATTGAAGTAAGCGGGGAC 95057 >seq2454 Length=432705 Score = 91.5 bits (100), Expect = 2e-13 Identities = 203/305 (67%), Gaps = 0/305 (0%) Strand=Plus/Plus Query 22444 TTTTATCAGGCATCTACATCAGAGCTCTACGGTAAAGTAAATGAAACTCCACAAAATGAA 22503 || || |||||||| ||||||||| | ||||| || || || || || |||| || Sbjct 169575 TTCTACCAGGCATCAACATCAGAGTTGTACGGCAAGGTCGTGGAGACGCCGCAAAGCGAG 169634 Query 22504 AATACACCGTTTTACCCGCGTTCACCATATGGGGTAGCTAAATTGATGGGATATTGGGCG 22563 | || || || || || ||| || || ||| || || ||| | |||||| Sbjct 169635 ACGACGCCCTTCTATCCTCGTAGCCCTTACGGGTGCGCCAAGTTGTACGCGTATTGGATA 169694 Query 22564 ACAGTTAATTATAGAGAATCATACGGTATGTTTGCATGCAATGGTATAATGTTCAACCAC 22623 || |||||| | || | || || ||||| || |||||||| ||| ||||||||||| Sbjct 169695 GTGGTCAATTATCGGGAGGCGTATGGGATGTTCGCGTGCAATGGGATATTGTTCAACCAC 169754 Query 22624 GAATCACCGAGACGGGGTGAAAACTTCGTGACACGAAAAATAACACTCGGTGTCGCTAAT 22683 || || ||||| || | ||||| ||||| || || ||| | || ||| || Sbjct 169755 GAGAGCCCCAGACGAGGGCGGACTTTCGTCACACGGAAGATTACAAGGGCTGCGGCTGAT 169814 Query 22684 ATCAGTGCAGGTAAACAAAAATGTTTATACCTTGGTAACCTAGATGCGAAACGAGATTGG 22743 ||| || || |||| || | || || || ||| | || || ||||||||||| Sbjct 169815 ATCTCCTTGGGAAAGCAAAGCTGCCTGTATCTGGGAAACTTGGACGCTCAACGAGATTGG 169874 Query 22744 GGTCA 22748 || || Sbjct 169875 GGACA 169879 >seq2476 Length=877278 Score = 86.0 bits (94), Expect = 8e-12 Identities = 103/138 (75%), Gaps = 4/138 (3%) Strand=Plus/Plus Query 7601 TCGAGACCGTACGCGATAGCCGCCGCCGTTGGTTCATTAATAATACGAAGACAGTTCAGG 7660 || || ||||| || | ||| ||||| || || ||||| || | ||| ||| || || Sbjct 177135 TCAAGGCCGTAAGCCAAAGCGGCCGCAGTCGGCTCATTGATGACACGCAGAACGTCCAAC 177194 Query 7661 CCAGCAATAGTTGCC--GCATCTTTCGTCGCTTGTCGTTGCGAATCGTTAAAGTAGGCCG 7718 |||||||| ||| | || || |||||||||||||| || | ||| || |||||||| | Sbjct 177195 CCAGCAAT--TTGACCGGCGTCCTTCGTCGCTTGTCGCTGAGCATCATTGAAGTAGGCGG 177252 Query 7719 GGACCGTTACGACCGCGT 7736 |||| || || || |||| Sbjct 177253 GGACAGTGACAACAGCGT 177270 >seq2248 Length=795099 Score = 82.4 bits (90), Expect = 1e-10 Identities = 193/289 (67%), Gaps = 2/289 (1%) Strand=Plus/Minus Query 184084 ATCGGTCATGATCATGAGTCTTCCGTATCTGAGTTCGGAGAGTGATGTATACACTTTCCC 184143 ||| ||||||||||| | || |||||||| || ||||| |||||| | || Sbjct 661225 ATCTGTCATGATCATCAATCGACCGTATCTCAGGCTGGAGACGTTGGTATACTCCTTATT 661166 Query 184144 TTGCTGAAGCCCCAAAATCTTTTTAAGATCATTAAACTCCTTGTT-TTCGGTAAGTTGTT 184202 || || || |||| ||||| || | | | | ||||| ||| ||| | | || Sbjct 661165 GTGTTGTAGACCCATGATCTTCTTGATGTTTTGGATCTCCTCGTTCTTCATGATCTGGTC 661106 Query 184203 TTACACTCGCGTCACGCACGTTCTTACATTTACCCCTAAGCGGAAAAACACCGTAATGAT 184262 | | ||||| || || || || ||||||| | ||| || || || || | | | Sbjct 661105 ATGC-CTCGCCTCCCGTACATTGAGTAATTTACCTCGAAGAGGGAAGACGCCAAAGTTGT 661047 Query 184263 CACGACCAACAACTGAAAGACCAGCAATTGCAAGTGTTTTTGCAGAATCACCTTCGGTAA 184322 | ||||||||||| | | |||||| | ||| || | ||| || || ||||||||||||| Sbjct 661046 CGCGACCAACAACGGCCAAACCAGCGACTGCCAGGGATTTGGCGGAGTCACCTTCGGTAA 660987 Query 184323 TAATAAGAGTACACTTACCAGAGTGTGTGGTACCGGCTTTATTGGCATC 184371 || ||||| || || | | | |||| ||||| || ||||| || Sbjct 660986 GGATGAGAGTGCATTTCTCTGCATTCTTGGTGCCGGCGTTGTTGGCGTC 660938 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 635112721864360