Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq1750 129 7e-25 seq1 84.2 3e-11 >seq1750 Length=1054334 Score = 129 bits (142), Expect = 7e-25 Identities = 192/267 (72%), Gaps = 8/267 (3%) Strand=Plus/Plus Query 102051 ATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACA 102110 || |||| || || |||||| ||| ||| | | |||||||| || ||| |||| Sbjct 415685 ATCGACACCTACATCAAGGATATTGCCGAGCGCGACTACCTCTTTGACGCTATCGAAACT 415744 Query 102111 GTTCCATGTATTCAAAAGAAAG-CGGATTGGGCTATGAAGTGG-TTTGATACAA--AGTC 102166 | || ||||| ||| | ||| | || |||||| | ||| ||| | || | | || Sbjct 415745 ATCCCCTGTAT-CAAGCGCAAGGCCGAGTGGGCTCTTCGATGGATTTCAGACCAGCAATC 415803 Query 102167 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 102226 | | ||||||||||| ||| | || || || ||| ||||||||||||||||| || Sbjct 415804 GA---CATTTGCTGAGCGTCTCGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCAGG 415860 Query 102227 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 102286 ||| ||| | |||| | ||| | |||||||| ||||| ||||| ||||| ||||| Sbjct 415861 TTCATTCGCCTCTATCTTCTGGTTGAAGAAGCGCGGTCTTATGCCTGGTCTTACTTTCTC 415920 Query 102287 CAACGAGCTTATCTCTCGTGACGAGGG 102313 ||||||||| ||| |||||||||||| Sbjct 415921 CAACGAGCTCATCAGTCGTGACGAGGG 415947 >seq1 Length=1328766 Score = 84.2 bits (92), Expect = 3e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 16059 CCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCA 16118 || |||||||||| || |||||||||| ||| ||||| || | ||||| | || Sbjct 1154094 CCGACGGCATCAAGTTCGTCAATGAAGATAATGGCAGGTTGCTTCTTCCGAGCCGCGGCA 1154153 Query 16119 AAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTC 16162 ||||||||||| || || || || ||||||||||| |||||||| Sbjct 1154154 AAGAGATCCCGCACGCGTTTCGCACCCACACCAACGAACATCTC 1154197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620722776780880