Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq190 111 1e-19 seq2481 98.7 6e-16 seq2467 96.9 2e-15 seq2476 89.7 3e-13 >seq190 Length=61660 Score = 111 bits (122), Expect = 1e-19 Identities = 143/195 (73%), Gaps = 8/195 (4%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || |||||||| || ||||| ||||| | || |||| || || ||||| ||||| || Sbjct 9982 TCCTTCTGAATATTGTAGTCAGAAAGAGTACGGCCATCCTCGAGTTGTTTGCCGGCGAAG 10041 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || ||||||| | || | ||||||||||| ||||||| ||||| || Sbjct 10042 ATGAGACGCTGCTGGTTGGGAGGGATACCCTCCTTGTCCTGAATCTTCGCCTTGAC--AT 10099 Query 34911 GCTATCGAT----TCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 ||||||| || || |||||| |||| || ||||| || || ||||| ||||| Sbjct 10100 --TATCGATGGTGTCCGAGGACTCAACTTCGAGAGTGATGGTCTTGCCAGTGAGGGTCTT 10157 Query 34967 CACAAAGATCTGCAT 34981 ||| ||||||||||| Sbjct 10158 CACGAAGATCTGCAT 10172 >seq2481 Length=1366164 Score = 98.7 bits (108), Expect = 6e-16 Identities = 137/192 (71%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 34790 TTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAA 34849 ||| |||||||||||||||||||| | | || |||| |||| ||| ||||| || || Sbjct 516408 TTCCTTCTGAATGTTATAGTCCGACAATGTGCGACCATCCTCCAACTGCTTTCCAGCGAA 516467 Query 34850 TATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGA 34909 || | ||||| ||||| | || | || |||||||| ||||| || ||| Sbjct 516468 AATCAAACGTTGTTGGTCAGGTGGAATTCCTTCCTTGTCTTGGATCTTTGCCTTAACGTT 516527 Query 34910 TGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCAC 34969 | || | || | |||||| |||| ||| || || ||||| ||||| ||||| || Sbjct 516528 GTCGATTGTGTCGGAAGACTCAACCTCGAGGGTGATAGTCTTTCCGGTGAGGGTCTTGAC 516587 Query 34970 AAAGATCTGCAT 34981 |||||||||||| Sbjct 516588 AAAGATCTGCAT 516599 >seq2467 Length=211848 Score = 96.9 bits (106), Expect = 2e-15 Identities = 136/191 (71%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| |||||||| ||| | || | || || ||||| || |||||||| Sbjct 155832 TCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAG 155773 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || || || || | || | ||||||||||| |||||| || ||| Sbjct 155772 ATGAGGCGCTGTTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTTACGTTG 155713 Query 34911 GCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTTCACA 34970 | |||| || || ||| || || | ||| ||||| || || || || |||||||| Sbjct 155712 TCGATCGTGTCGGAGGACTCGACCTCCAGGGTGATGGTCTTGCCAGTAAGCGTCTTCACG 155653 Query 34971 AAGATCTGCAT 34981 ||||||||||| Sbjct 155652 AAGATCTGCAT 155642 >seq2476 Length=877278 Score = 89.7 bits (98), Expect = 3e-13 Identities = 138/195 (71%), Gaps = 8/195 (4%) Strand=Plus/Minus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| ||||| ||||| | || | || || || || || ||||| || Sbjct 851212 TCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCGTCCTCGAGTTGCTTGCCGGCGAAG 851153 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACGGAT 34910 || || || || ||||| | || | ||||||||||| ||||||| ||||| Sbjct 851152 ATGAGGCGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTGAC---- 851097 Query 34911 GCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCTT 34966 | ||||||| | ||| | || || |||| ||| ||||| || || || || ||||| Sbjct 851096 GTTATCGATGGTGTCCGATGATTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTCTT 851037 Query 34967 CACAAAGATCTGCAT 34981 || ||||||||||| Sbjct 851036 AACGAAGATCTGCAT 851022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324623594082312