Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_015960.1 Length=175699 Score E Sequences producing significant alignments: (Bits) Value seq1750 143 3e-29 >seq1750 Length=1054334 Score = 143 bits (158), Expect = 3e-29 Identities = 356/537 (66%), Gaps = 5/537 (1%) Strand=Plus/Plus Query 18982 CCCTCGTCTCTACTTATCAATTCATTAGAAAATGTTAAACCAGGCATCAGTCCTCttttt 19041 ||||| ||||||| || | ||||| || || || | ||||| | | ||| | || Sbjct 413668 CCCTCATCTCTACAGATGAGCTCATTGGAGAAGGTAAGGCCAGGTAGTAATCCACGCTTC 413727 Query 19042 tttAACCAGAATATAGAAGCAAATGATCCAGAAAAGAATATACCTTCTACTGCTGCAAAA 19101 || | ||| ||||| ||||| || ||||||||||||||||| || ||||| || || || Sbjct 413728 TTGAGCCAAAATATTGAAGCGAACGATCCAGAAAAGAATATGCCCTCTACGGCAGCGAAT 413787 Query 19102 GCAACTAGTCTTTCTCCATAACTAGCATC-ATTATTATGAATCCATTTCAGTGCCCAATC 19160 ||||| || | | | | || | ||| || | | |||||| || ||||| || Sbjct 413788 GCAACGAGGCGTACAGC-GAATGAAGATCGTTTGTCTTCTATCCATCGGAGAGCCCATTC 413846 Query 19161 AGCCTTCTTTTTTACACATGGCATTGTCTCTATAGAATTAAATAGATACATACGCTCATC 19220 ||||| | || | |||||| || || || || | || ||||| | | || |||| Sbjct 413847 TGCCTTTTGCTTGATACATGGTATGGTTTCAATGGCATCGAATAGGTGCTGGCGTTCATT 413906 Query 19221 TGTATCTTTAACATATGCATCTATCAATAAACTGTACATTTCTGAATGAATATTTTCTAT 19280 | ||||| | ||| | ||| || | | | || | || ||||| |||||||| || Sbjct 413907 CGGCTCTTTGATATAGGTATCAATGAGCATAGAATAGGTCTCCGAATGTATATTTTCCAT 413966 Query 19281 AGCCATCTGAAATCCGTAAAAACATCTTGCTTCTGTTATCTGTACTTCACTACAAAATCT 19340 || || |||||||| ||||| | ||||||| | || ||||| || | || | Sbjct 413967 CATTATTTGGAATCCGTAGAAACAGCGCGCTTCTGCGACTTGGACTTCGCTTGAGAAGCG 414026 Query 19341 TTCGACCAAATTTTCATTAACTATTCCATCACTAGCTGCAAAAAATGCTAATACATGTTT 19400 ||| || | || ||||| || || ||||| || || || || || | | | Sbjct 414027 TTCAACAAGGTTCTCATTGACGATGCCATCCGACGCCGCGAAGAAGGCGAGGATGCGGGA 414086 Query 19401 AATAAAATGTTTTTCATCTGAGGTTAAT---GTATTCCAATCATTAATATCTTTAGATAA 19457 || || | |||||| ||||||| |||||| || | |||||||| | Sbjct 414087 GATGAAGAATCGTTCATCGTCGGTTAATCGAAGATTCCAGTCCATCCAGTCTTTAGAGAG 414146 Query 19458 ATCTACTTCTTCAACTGTCCAAAAAGAAGCCTCTGCTTTTTTATACATGTTCCATAT 19514 ||| | ||||| || |||||||||||||||| || | || ||||| | |||||| Sbjct 414147 ATCAATCTCTTCGACGGTCCAAAAAGAAGCCTGCGCCTGCTTGTACATCTGCCATAT 414203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 562091030335560