Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq2481 104 2e-16 seq1 89.7 4e-12 >seq2481 Length=1366164 Score = 104 bits (114), Expect = 2e-16 Identities = 157/221 (71%), Gaps = 2/221 (1%) Strand=Plus/Plus Query 563256 GAGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCT 563315 ||||||||| ||||| || || ||| || || || |||||||||| ||||| | Sbjct 516609 GAGACGGAGAACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCG 516668 Query 563316 TGAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTC 563375 |||||| ||||| || ||||| || ||||| | || ||||| |||||||||||||| Sbjct 516669 GCCATCTTCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGTTGATCGGGAGGAATTCCTTC 516728 Query 563376 TTTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAG 563434 || || ||||| || ||| || || || || || | | || | | ||||||| Sbjct 516729 CTTGTCCTGAATCTTGGCTTTCACGTTATCGATGGTGTCGGAG-GACTCGACCTCGAGAG 516787 Query 563435 TAACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | | || || ||||| | ||| || ||||| || |||||| Sbjct 516788 TGATCGTCTTGCCAGTCAAAGTCTTCACGAAGATCTGCATA 516828 >seq1 Length=1328766 Score = 89.7 bits (98), Expect = 4e-12 Identities = 97/129 (75%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 550021 TAGTTGTGTTGGTGTTTGGCAAAATGGTAAAGTTGAAATTATTGCCAATGATCAAGGTAA 550080 |||||| || ||||| |||||||| | ||| || || || ||||||||||| ||||| Sbjct 1000645 TAGTTGCGTCGGTGTCTGGCAAAACGACCGAGTCGAGATCATCGCCAATGATCAGGGTAA 1000704 Query 550081 CAGAACTACTCCATCTTATGTTTCTTTCACGGAAACTGAACATTTAGTTGGTGATGCAGC 550140 | |||| || || || ||||| || ||| |||| || |||| | | | |||||||| || Sbjct 1000705 CCGAACGACGCCCTCATATGTCTCGTTCTCGGACACCGAACGTCTGATCGGTGATGCCGC 1000764 Query 550141 AAAATATCA 550149 || |||| Sbjct 1000765 CAAGAATCA 1000773 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4029162255074210