Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq1750 105 8e-18 >seq1750 Length=1054334 Score = 105 bits (116), Expect = 8e-18 Identities = 272/413 (66%), Gaps = 6/413 (1%) Strand=Plus/Plus Query 37197 CCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCTGGCATTAAACCTCttttt 37256 || |||||||||| || | ||||| || ||||| | || || | ||| || | || Sbjct 413668 CCCTCATCTCTACAGATGAGCTCATTGGAGAAGGTAAGGCCAGGTAGTAATCCACGCTTC 413727 Query 37257 ttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAAT 37316 || | ||||||||||| || || |||||||||||||| || || || || || || ||| Sbjct 413728 TTGAGCCAAAATATTGAAGCGAACGATCCAGAAAAGAATATGCCCTCTACGGCAGCGAAT 413787 Query 37317 GCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATCCAtttttttGTCCAATCT 37376 || || || ||| | |||| | || | | || |||||| | ||| ||| Sbjct 413788 GCAACGAGGCGTACAGCGAATGAAGATCGTTTGTCTTCTATCCATCGGAGAGCCCATTCT 413847 Query 37377 GCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAGAGAAAGtttttttCTTCA 37436 |||||| || | |||| || |||||||| || | || || || | |||| Sbjct 413848 GCCTTTTGCTTGATACATGGTATGGTTTCAATGGCATCGAATAG---GTGCTGGCGTTCA 413904 Query 37437 CT---ATCTGTTATATAAGTATCAATTAGTAAACTATACATTTCAGAGTGAATATTTTCA 37493 | ||| | ||||| |||||||| || | | ||| | || || || |||||||| Sbjct 413905 TTCGGCTCTTTGATATAGGTATCAATGAGCATAGAATAGGTCTCCGAATGTATATTTTCC 413964 Query 37494 ATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATTGAACATCGTTAAAAAAC 37553 || ||| || || || || ||||| | ||||| | | ||| || ||| | | || Sbjct 413965 ATCATTATTTGGAATCCGTAGAAACAGCGCGCTTCTGCGACTTGGACTTCGCTTGAGAAG 414024 Query 37554 CTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAAAGAAAGCAAG 37606 | | | | | ||| ||||| || || ||||| || || ||||| || || Sbjct 414025 CGTTCAACAAGGTTCTCATTGACGATGCCATCCGACGCCGCGAAGAAGGCGAG 414077 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592298075385160