Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq2481 122 7e-23 seq2467 86.0 5e-12 >seq2481 Length=1366164 Score = 122 bits (134), Expect = 7e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 ||||| | | ||| | ||| | || || ||||| || || || || |||||||| | Sbjct 516601 CCTCCGCGGAGACGGAGAACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCAGAA 516660 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||| | | |||| || | |||||| || || || || | |||||||||||||| ||| Sbjct 516661 AGAGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGTTGATCGGGAGGA 516720 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || ||||| || || ||||| || ||| || | || | ||||| || | || || Sbjct 516721 ATTCCTTCCTTGTCCTGAATCTTGGCTTTCACGTTATCGATGGTGTCGGAGGACTCGACC 516780 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || ||||||| ||| ||||| || ||||| || || || |||||||| Sbjct 516781 TCGAGAGTGATCGTCTTGCCAGTCAAAGTCTTCACGAAGATCTGCAT 516827 >seq2467 Length=211848 Score = 86.0 bits (94), Expect = 5e-12 Identities = 149/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| || || | ||| || || || || || || || ||||| || | || || | | | Sbjct 155857 ACGCAAGACAAGATGGAGCGTTGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCC 155798 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 || || | ||||| || ||||| || | |||||||||||||| || ||||| || || Sbjct 155797 GTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGATCGGGAGGGATGCCCTCCTT 155738 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 || || || || ||||| | || | ||||| || | || || || || |||| Sbjct 155737 GTCCTGGATCTTCGCCTTTACGTTGTCGATCGTGTCGGAGGACTCGACCTCCAGGGTGAT 155678 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || ||||| || | || || || || ||||||||| Sbjct 155677 GGTCTTGCCAGTAAGCGTCTTCACGAAGATCTGCATG 155641 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396266185832853