Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1750 203 6e-47 >seq1750 Length=1054334 Score = 203 bits (224), Expect = 6e-47 Identities = 383/563 (68%), Gaps = 3/563 (1%) Strand=Plus/Minus Query 48125 AGCATGCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAG 48184 |||| ||| || ||||| |||||| ||| ||||| || ||||||||| |||||||||| Sbjct 415974 AGCAGGCAAGCGAAGTCGGTGTGCATGCCCTCGTCACGACTGATGAGCTCGTTGGAGAAA 415915 Query 48185 CAGAGACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAG 48244 ||||||||||| | || | || || | |||||| || | ||||| || || ||| Sbjct 415914 GTAAGACCAGGCATAAGACCGCGCTTCTTCAACCAGAAGATAGAGGCGAATGAACCTGAG 415855 Query 48245 AAGAAGATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTG 48304 |||||||| ||||| || || ||||| || ||| | ||| | || | | | || | Sbjct 415854 AAGAAGATACCCTCGACAGCGGCGAAGGCAACGAGACGCTCAGCAAATGTCGATTGCTGG 415795 Query 48305 TCTGAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATG 48364 ||||| ||||| ||| ||||| || ||||| |||||| || || || || || || Sbjct 415794 TCTGAAATCCATCGAAGAGCCCACTCGGCCTTGCGCTTGATACAGGGGATAGTTTCGATA 415735 Query 48365 GCCCGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCG 48424 || ||||| | | || ||| | ||| | ||||| || || | || Sbjct 415734 GCGTCAAAGAGGTAGTCGCGCTCGGCAATATCCTTGATGTAGGTGTCGATCAACAATGAA 415675 Query 48425 TACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCA 48484 || |||||||||| | ||||| || |||||||| ||||||||| | |||||| Sbjct 415674 TAGGTCTCAGAGTGGATGTTCTCCATCATTATCTGGAAACCGTAGAAGCAGCGAGCCTCA 415615 Query 48485 AACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAA 48544 || |||||||| | ||||| | || | || || || ||||| || ||||| ||| Sbjct 415614 GCGACTTGCACTTCGTTCGAGAAACGTTCGACGAGGTTTTCGTTGACAATGCCATCCGAA 415555 Query 48545 GCAGCAAAGAAGGCAAGGACATGTTTAAGGAAATGGCGCTCGTTGTGGGTGAGAGCAT-- 48602 || || ||||| || || || || | ||| || |||||| | | | || | Sbjct 415554 GCGGCGAAGAAAGCGAGAACGTGAGAGATGAAGTGACGCTCGCCATCGTTCAGCTTGTTT 415495 Query 48603 -TCCAGCCCTGTACGTCTTTGCCCAGGTCCACTTCTTCCACAGTCCAGAAGGACGCGAGT 48661 ||||| | || | |||||| || |||| || || ||||||||||||| || Sbjct 415494 GTCCAGTCATGGATATCTTTGGAAAGATCCATCTCCTCAGCAGTCCAGAAGGAAGCCTCA 415435 Query 48662 GCTTTTTTGTACATGCCCCATAT 48684 ||||| |||||||| |||||| Sbjct 415434 GCTTTCTTGTACATTTGCCATAT 415412 Score = 145 bits (160), Expect = 1e-29 Identities = 295/436 (68%), Gaps = 4/436 (1%) Strand=Plus/Plus Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 ||| || || || |||||| ||| || || | | ||||||| | ||||||||| || Sbjct 413646 GCAAGCGAATTCGGTGTGCATGCCCTCATCTCTACAGATGAGCTCATTGGAGAAGGTAAG 413705 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 ||||| | | || | || |||||||| || |||| ||||| || ||||| ||||| Sbjct 413706 GCCAGGTAGTAATCCACGCTTCTTGAGCCAAAATATTGAAGCGAACGATCCAGAAAAGAA 413765 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAG--CGTTCTTGTCT 48307 |||||||| || || ||||| || ||| | | |||| |||| |||| ||||| Sbjct 413766 TATGCCCTCTACGGCAGCGAATGCAACGAGGCGTACAGCGAATGAAGATCGTT--TGTCT 413823 Query 48308 GAGATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCC 48367 ||||| || ||||| |||||||| | |||||| ||||| || || || ||||| Sbjct 413824 TCTATCCATCGGAGAGCCCATTCTGCCTTTTGCTTGATACATGGTATGGTTTCAATGGCA 413883 Query 48368 CGGAAGAGCTTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTGCGTAC 48427 ||| || | || || ||| | || | ||||||| | ||| | | || Sbjct 413884 TCGAATAGGTGCTGGCGTTCATTCGGCTCTTTGATATAGGTATCAATGAGCATAGAATAG 413943 Query 48428 ATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCTCAAAC 48487 |||| || || | ||| || || || ||||| |||||||| | || || Sbjct 413944 GTCTCCGAATGTATATTTTCCATCATTATTTGGAATCCGTAGAAACAGCGCGCTTCTGCG 414003 Query 48488 ACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTGAAGCA 48547 || || ||||| | ||||| | || | || ||||||||||| || ||||| || || Sbjct 414004 ACTTGGACTTCGCTTGAGAAGCGTTCAACAAGGTTCTCATTGACGATGCCATCCGACGCC 414063 Query 48548 GCAAAGAAGGCAAGGA 48563 || |||||||| |||| Sbjct 414064 GCGAAGAAGGCGAGGA 414079 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931503351919360