Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1750 150 3e-31 seq2043 86.0 1e-11 >seq1750 Length=1054334 Score = 150 bits (166), Expect = 3e-31 Identities = 376/565 (67%), Gaps = 7/565 (1%) Strand=Plus/Plus Query 25477 ATATGGGAGATGTACAAGAAGGCTCAAAACTCAAACTGGACCGCCGAAGAGATTGATCTG 25536 |||||| | ||||||||||| ||| | || |||||| || || ||||| ||||| Sbjct 415412 ATATGGCAAATGTACAAGAAAGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATGGATCTT 415471 Query 25537 GCCAAGGACATGGACGGCTGGT---ACGCTCTATCCAAAGACGAGCAGCATTTTCTCAAG 25593 |||| || || | | |||| || || | | | ||||| || || || Sbjct 415472 TCCAAAGATATCCATGACTGGACAAACAAGCTGAACGATGGCGAGCGTCACTTCATCTCT 415531 Query 25594 TACGTGTTGGCATTCTTTGCAGCCTCTGATGGTATAGTGAACGAGAATCTGTGCGAGAGA 25653 |||| | || ||||| || || || ||||| || || ||||| || || ||| | Sbjct 415532 CACGTTCTCGCTTTCTTCGCCGCTTCGGATGGCATTGTCAACGAAAACCTCGTCGAACGT 415591 Query 25654 TTCACCAGGGAAGTGCAGTACGTGGAGGCCAAGTGTTTCTACGGTTTCCAGATGGCCATC 25713 ||| | | |||||||| || ||||| || ||||||||||||||||| || Sbjct 415592 TTCTCGAACGAAGTGCAAGTCGCTGAGGCTCGCTGCTTCTACGGTTTCCAGATAATGATG 415651 Query 25714 GAAAATGTGCACTCTGAGGTGTATGCCAAGCTTCTGATGACGTACATTACAGACGTCGCC 25773 || || | ||||||||| ||| | | | | || ||||| | || | ||| Sbjct 415652 GAGAACATCCACTCTGAGACCTATTCATTGTTGATCGACACCTACATCAAGGATATTGCC 415711 Query 25774 GAGAGAGATCGGCTGTTTGGTGCCATCGAGCACATACCCAGCATCAAGAGGAAGGCGCGG 25833 ||| | || || |||| || ||||| || ||| | |||||| | ||||| | Sbjct 415712 GAGCGCGACTACCTCTTTGACGCTATCGAAACTATCCCCTGTATCAAGCGCAAGGCCGAG 415771 Query 25834 TGGGCCATGAAGTGGATCAACAG-CCAGAGCGCTACGTTTGGCGAGCGGCTGGTAGCCTT 25892 ||||| | ||||| ||| |||| | || |||| ||||| || || ||||| Sbjct 415772 TGGGCTCTTCGATGGATTT-CAGACCAGCAATCGACATTTGCTGAGCGTCTCGTTGCCTT 415830 Query 25893 TGCTGCTGTGGAGGGCATCTTTTTCAGCGGTTCGTTTGCGGCCATCTTCTGGCTCAAGCA 25952 || ||||| ||||| ||||| ||| ||||| || || | ||||||||| | ||| | Sbjct 415831 CGCCGCTGTCGAGGGTATCTTCTTCTCAGGTTCATTCGCCTCTATCTTCTGGTTGAAGAA 415890 Query 25953 GAAGGGGACCATGCCCGGGCTGTACTTT-TCCAACGAGCTCATCAGCAGGGACGAGGGTC 26011 | || ||||| || || |||||| ||||||||||||||||| | |||||||| Sbjct 415891 GCGCGGTCTTATGCCTGGTCT-TACTTTCTCCAACGAGCTCATCAGTCGTGACGAGGGCA 415949 Query 26012 TCCACAGAGATTTTGCCTGCCTGCT 26036 | |||| || || || |||||||| Sbjct 415950 TGCACACCGACTTCGCTTGCCTGCT 415974 >seq2043 Length=178294 Score = 86.0 bits (94), Expect = 1e-11 Identities = 200/294 (68%), Gaps = 6/294 (2%) Strand=Plus/Plus Query 221360 GGACTCCCATCGTACGACTCGTAGGGACCGTACAGTTCGGCCTGGGCGCAAGACTGCGTC 221419 ||||| || ||||||| |||||| | || | | || ||| |||| | || || Sbjct 126369 GGACTGCCTTCGTACGTCTCGTAAGCTCCTTCCTTCTCCGCCATTTCGCA-GCTAGCCTC 126427 Query 221420 -AGGGCAGCGTGGTAGATGGTCTCAAAGATCATCTTGTT-GAGTCTCTTGGCCTCGGGAG 221477 || | || || ||||| ||||||||||| || ||| | |||| |||| |||| | Sbjct 126428 GAGACCGGCATGATAGATAGTCTCAAAGATTTGCTGGTTCAACTCTC-TGGCAGCGGGCG 126486 Query 221478 AAGTGAAGGGCATACGCAGCATC-TGAAAGACGTCGGCCAGTCCCTGTACTCCGATACCG 221536 || |||||| || | || | |||| | |||| || || || || || || || ||| Sbjct 126487 AATCGAAGGGGATGCCGAGAGCCATGAACG-CGTCAGCGAGGCCTTGCACACCAATGCCG 126545 Query 221537 ATGGGCCTGTGTCTCCTGTTGGAAGCGGCCGCTTCTGGCACGGGATAAAAGTTGACGTCG 221596 ||||| | ||| | | |||| || ||| || || |||||||| |||||| |||| Sbjct 126546 ATGGGACGGTGGCGCATGTTCGACTTACGCGCCTCGGGTACGGGATAGTAGTTGATGTCG 126605 Query 221597 ATCAGATTGTTGAGGTTCAGAGTGATGACTTTAACCACCTCGGTCAGCTTCTGG 221650 || | | ||||||||| | | || |||||| | || ||| | ||||||| Sbjct 126606 ATGATACGGTTGAGGTTGAACGCGACGACTTTGGCGACGTCGTGTAACTTCTGG 126659 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928815436893760