Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1750 91.5 2e-13 seq2481 82.4 9e-11 seq2248 82.4 9e-11 >seq1750 Length=1054334 Score = 91.5 bits (100), Expect = 2e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 64990 TTTGAAGCCATCCAAACTGTACCATGTATTGAGAAGAAGGCGAAATGGGCAATGAAATGG 65049 ||||| || ||| ||||| | || ||||| || ||||| | ||||| | |||| Sbjct 415727 TTTGACGCTATCGAAACTATCCCCTGTATCAAGCGCAAGGCCGAGTGGGCTCTTCGATGG 415786 Query 65050 -TTTGACACAAAGTCTCGCTCCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGG 65108 ||| | || | ||| | || || ||||| || |||| || || ||| ||||| Sbjct 415787 ATTTCAGACCAGCAATCGA-CATTTGCTGAGCGTCTCGTTGCCTTCGCCGCTGTCGAGGG 415845 Query 65109 TATCTTCTTCTCCGGGTCATTCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCC 65168 |||||||||||| || |||||| | |||| | |||||||||||||| ||||| ||||| Sbjct 415846 TATCTTCTTCTCAGGTTCATTCGCCTCTATCTTCTGGTTGAAGAAGCGCGGTCTTATGCC 415905 Query 65169 AGGCCTATGCTTCTCAAATGAACTTAT 65195 || || ||||| || || || || Sbjct 415906 TGGTCTTACTTTCTCCAACGAGCTCAT 415932 >seq2481 Length=1366164 Score = 82.4 bits (90), Expect = 9e-11 Identities = 124/174 (71%), Gaps = 2/174 (1%) Strand=Plus/Plus Query 175275 TGGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCT 175334 |||||| |||||||| ||||| ||| | ||| | || || || || || || || || Sbjct 1214215 TGGTGCAAAGATCCCGCGAGGGGCCATCCTCTCTGGACCACCTGGAACTGGTAAAACTCT 1214274 Query 175335 CCTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTCATC-CAGTGCTCTGCCGCAA 175393 || || || | |||||| ||| | |||||||| ||| || | || ||||| | Sbjct 1214275 ACTTGCGAAGGCAACCGCGGGCGAAGCCAATGTCCCCTTCCTCTCCGT-CTCTGGTTCTG 1214333 Query 175394 ACTTTGTGGAGATGTTTGTTGGTGTGGGTGCCAAAAGGGTTCGCGATCTCTTTG 175447 | || ||||||||||| ||||| || ||| | ||||| || |||||||||| Sbjct 1214334 AATTCGTGGAGATGTTCGTTGGCGTCGGTTCTTCCAGGGTGCGAGATCTCTTTG 1214387 >seq2248 Length=795099 Score = 82.4 bits (90), Expect = 9e-11 Identities = 160/233 (69%), Gaps = 10/233 (4%) Strand=Plus/Plus Query 13570 TGACGCGAACAAGGCGGGTACGGCACAATCTGGA-AAGTGTACTCTCATTGTCACAGAGG 13628 |||||| ||||| || || || | ||| || || || |||||||| | || || | Sbjct 660937 TGACGCCAACAACGCCGGCACCA-AGAATGCAGAGAAATGCACTCTCATCCTTACCGAAG 660995 Query 13629 GTGATTCGGCTAAAACCCTCGCGGTTGCGGGTCTCTCTGTCGTTGGTCGTGATCACTACG 13688 |||| || || ||| |||| || || || ||| | | || |||||||| || ||| | Sbjct 660996 GTGACTCCGCCAAATCCCTGGCAGTCGCTGGTTTGGCCGTTGTTGGTCGCGACAACTTTG 661055 Query 13689 GTGTGTTCCCACTTCGCGGTAAATGTAAGAATGTTCGGGACGCTTCGGTGGCA----CAG 13744 | || ||||| ||||| ||||||| ||||| ||||| || | |||| ||| Sbjct 661056 GCGTCTTCCCTCTTCGAGGTAAATTACTCAATGTACGGGAGGC----GAGGCATGACCAG 661111 Query 13745 CTCACATCAAACCAGGAGTTCAACGATCTCAAGAAGATCCTTGGTCTTCAACA 13797 ||| ||| ||||| || | | ||||||||||| | ||||| ||||| Sbjct 661112 ATCATGAAGAACGAGGAGATCCAAAACATCAAGAAGATCATGGGTCTACAACA 661164 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596550740943520