Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1750 114 4e-20 seq2455 93.3 1e-13 >seq1750 Length=1054334 Score = 114 bits (126), Expect = 4e-20 Identities = 249/368 (68%), Gaps = 6/368 (2%) Strand=Plus/Minus Query 133292 GAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATC 133351 ||||| ||| | || ||||| || || || || | || || |||||||||||| Sbjct 414014 GAAGTCCAAGTCGCAGAAGCGCGCTGTTTCTACGGATTCCAAATAATGATGGAAAATATA 413955 Query 133352 CATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGC-A 133410 ||||| || ||||||| || |||||||| || |||||||| ||| | || | Sbjct 413954 CATTCGGAGACCTATTCTATGCTCATTGATACCTATATCAAAGAG-CCGAATGAACGCCA 413896 Query 133411 CAAACTATTCAACGCCATT--AGCGAATTTCCTTGTATTAAAAAGAAATCTGACTGGGCT 133468 | |||||| | |||||| | | | | || ||||| || | || | || |||||| Sbjct 413895 GCACCTATTCGATGCCATTGAAACCA--TACCATGTATCAAGCAAAAGGCAGAATGGGCT 413838 Query 133469 ATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTA 133528 | |||||| | ||||| || | || ||| || |||||||| || |||| Sbjct 413837 CTCCGATGGATAGAAGACAAACGATCTTCATTCGCTGTACGCCTCGTTGCATTCGCTGCC 413778 Query 133529 GTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGT 133588 ||||||||||| || || ||| ||||| || || |||||||| || |||||||| Sbjct 413777 GTAGAGGGCATATTCTTTTCTGGATCGTTCGCTTCAATATTTTGGCTCAAGAAGCGTGGA 413718 Query 133589 ATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACC 133648 | |||||||| || || || || || || || | || || |||| | |||||| Sbjct 413717 TTACTACCTGGCCTTACCTTCTCCAATGAGCTCATCTGTAGAGATGAGGGCATGCACACC 413658 Query 133649 GAATTTGC 133656 ||||| || Sbjct 413657 GAATTCGC 413650 Score = 87.8 bits (96), Expect = 5e-12 Identities = 241/368 (65%), Gaps = 6/368 (2%) Strand=Plus/Plus Query 133292 GAAGTTCAACTGGCCGAAGCCCGTGCCTTTTATGGGCTACAGATTGCGATGGAAAATATC 133351 ||||| ||| | || || || || ||| || || | ||||| |||||| || ||| Sbjct 415601 GAAGTGCAAGTCGCTGAGGCTCGCTGCTTCTACGGTTTCCAGATAATGATGGAGAACATC 415660 Query 133352 CATTCTATCACATATTCTACTCTAATTGATACTTACATCAAAGATACCGTCCAGAAGCAC 133411 || ||| || ||||| | || || || |||||||| |||| | | || || Sbjct 415661 CACTCTGAGACCTATTCATTGTTGATCGACACCTACATCAAGGATATTGCCGAGCGCGAC 415720 Query 133412 AAACTATTCAACGCCATTAGCGAATTT---CCTTGTATTAAAAAGAAATCTGACTGGGCT 133468 | || || |||| || |||| | || ||||| || || | || |||||| Sbjct 415721 TACCTCTTTGACGCTAT---CGAAACTATCCCCTGTATCAAGCGCAAGGCCGAGTGGGCT 415777 Query 133469 ATTAAATGGATCCAGGACAAGCGTGCGAGTTTTGCTACTCGTCTCGTTGCTTTTGCTGTA 133528 || |||||| ||| ||| ||| |||||| ||||||||||| || || | Sbjct 415778 CTTCGATGGATTTCAGACCAGCAATCGACATTTGCTGAGCGTCTCGTTGCCTTCGCCGCT 415837 Query 133529 GTAGAGGGCAtttttttCAGTGGTGCGTTCTGCTCTATTTTTTGGCTTAAAAAGCGTGGT 133588 || ||||| || || ||| ||| | ||| |||||| || ||| | || ||||| ||| Sbjct 415838 GTCGAGGGTATCTTCTTCTCAGGTTCATTCGCCTCTATCTTCTGGTTGAAGAAGCGCGGT 415897 Query 133589 ATTCTACCTGGACTGTGTTTTTCTAACGAACTTATTTCAAGGGACGAGGCACTTCACACC 133648 || | ||||| || ||| || ||||| || || | ||||||| | |||||| Sbjct 415898 CTTATGCCTGGTCTTACTTTCTCCAACGAGCTCATCAGTCGTGACGAGGGCATGCACACC 415957 Query 133649 GAATTTGC 133656 || || || Sbjct 415958 GACTTCGC 415965 >seq2455 Length=549447 Score = 93.3 bits (102), Expect = 1e-13 Identities = 116/154 (75%), Gaps = 4/154 (3%) Strand=Plus/Plus Query 251836 AGTTGGGCGATAGTCATACGACTGGGAATAGCATGGGGATTGATGATGATGTCGGGTTTC 251895 || ||| |||| |||||||| ||||| || ||||| ||||||||||| || || Sbjct 398003 AGATGGCCGATTGTCATACGTGACGGAATGGCGTGGGGGTTGATGATGATATCTGGGACG 398062 Query 251896 AGTCCATCAGCA-GTGAAGGGCATATCCT-TTTCCTCAATAATGTTTCCAATAGTTCCCT 251953 | ||| || ||| ||||||||||| |||| || ||| || | | |||||||| |||| Sbjct 398063 ATTCCTTC-GCATGTGAAGGGCATGTCCTCTTGCCTGTAT-GTTATACCAATAGTACCCT 398120 Query 251954 TTTGTCCGTGACGAGAACTGAACTTATCACCAAT 251987 | ||||||||||| || ||||| |||||||| Sbjct 398121 TCTGTCCGTGACGCGAGGCAAACTTGTCACCAAT 398154 Score = 86.0 bits (94), Expect = 2e-11 Identities = 115/160 (72%), Gaps = 0/160 (0%) Strand=Plus/Plus Query 251414 CACACTTATTACACACATGGACGCTGTAAGCATCAGATGCGTCATATAGCCGACCCTTGG 251473 ||||| ||| ||| || || | | ||||| ||| || || | || || |||| Sbjct 397581 CACACATATCACAAACGTGCAGACGATAAGCGTCACTGGCTTCGAACAGGCGTTCCTTCA 397640 Query 251474 TGAAGCGAGATGCACCGTGTGAAATCATACAATCACGCTCCATTTCACCGAAACGAAGAC 251533 ||| | || ||| || ||||||||||||||||| ||||| || |||||||| | || Sbjct 397641 AGAAACCAGCGATACCATGCGAAATCATACAATCACGTTCCATCTCTCCGAAACGCAAAC 397700 Query 251534 CACCATCGCGAGCCCTACCCTCGGCAGGCTGACGAGTGAG 251573 ||||||| ||| || |||||| | || || |||||||| Sbjct 397701 CACCATCTCGACTTCTTCCCTCGACTGGTTGGCGAGTGAG 397740 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471769908970273