Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq1750 123 3e-22 seq2043 113 6e-19 >seq1750 Length=1054334 Score = 123 bits (136), Expect = 3e-22 Identities = 129/167 (77%), Gaps = 2/167 (1%) Strand=Plus/Plus Query 868718 TCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGGC 868777 || || || ||||||||||||| | || |||| |||||| | ||| ||||| || Sbjct 413325 TCAAAGAAATTGGTCTTGCCCTGCATTGATATCATCTCCATGAAGTCGAAGGGGTT-GGA 413383 Query 868778 GTCTTG-TAGTGCTTTTCGCATCCGAGCGACGCGAGCAGGCGGTCGGCGACAAACTCGAT 868836 | |||| |||| ||||| |||||| || |||| ||||| ||||||||||| || || Sbjct 413384 GGCTTGATAGTACTTTTGATTTCCGAGAGAAACGAGTAGGCGATCGGCGACAAATTCAAT 413443 Query 868837 GTACTGGCACATGAGGCCGGCGTTCATGCCGATGAGCGCCACCGGCA 868883 |||||| |||||||||| |||||||| ||||| || || ||||||| Sbjct 413444 GTACTGACACATGAGGCTCGCGTTCATACCGATAAGGGCGACCGGCA 413490 Score = 120 bits (132), Expect = 4e-21 Identities = 201/287 (70%), Gaps = 9/287 (3%) Strand=Plus/Minus Query 869180 CCTTCGTCGCGACTGATCATTTCGTTGCTAAAGGCGAGGCCGGGCATGAGGCCGCGCTTC 869239 || ||||| |||||||| | |||||| || | || || ||||| || ||||||||| Sbjct 415947 CCCTCGTCACGACTGATGAGCTCGTTGGAGAAAGTAAGACCAGGCATAAGACCGCGCTTC 415888 Query 869240 TTGAGCCAAAAGATGGCGCAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAAG 869299 || | ||| ||||| | | ||| || ||||| ||||| |||||||| ||||| ||| Sbjct 415887 TTCAACCAGAAGATAGAGGCGAATGAACCTGAGAAGAAGATACCCTCGACAGCGGCGAAG 415828 Query 869300 CCGATGAGCCGCTCGGCAAAGGTGTCGAGGCCCTCCTTGT-TG--ATCCACTTCATCGCC 869356 | | ||| ||||| ||||| |||||| | || || || ||||| | ||| Sbjct 415827 GCAACGAGACGCTCAGCAAA--TGTCGA----TTGCTGGTCTGAAATCCATCGAAGAGCC 415774 Query 869357 CAGTCGGCCTTTTTCCTCACCGACGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTT 869416 || |||||||| | | | | || | || ||||| ||| |||||||| ||| Sbjct 415773 CACTCGGCCTTGCGCTTGATACAGGGGATAGTTTCGATAGCGTCAAAGAGGTAGTCGCGC 415714 Query 869417 TCGGCCGGGTCCTTGACATAGGTGTCGATCAGGAGCGAATAGGTCTC 869463 ||||| ||||||| ||||||||||||| | ||||||||||| Sbjct 415713 TCGGCAATATCCTTGATGTAGGTGTCGATCAACAATGAATAGGTCTC 415667 Score = 105 bits (116), Expect = 8e-17 Identities = 138/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 868684 GACGTGCGCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAG 868743 ||||| ||||| | ||| || |||||| ||||| ||||| |||||||||| || Sbjct 416321 GACGTTAGCCTTCGAGTAGTCAGAGACGCGCTTTTCGAAGAAGTTCGTCTTGCCCTGCAG 416262 Query 868744 CGAGATCAACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTTTTCGCATCCGAG 868803 |||||||| ||||| | ||| || || | || ||||| ||| ||| || || Sbjct 416261 CGAGATCATGTCCATGAAGTCGAAGGGATTCGTCGAATTGTACACCTTGTCGTTGCCAAG 416202 Query 868804 CGACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCAT 868863 || | || || || || || || || || ||||||||||||||||| |||||||| Sbjct 416201 GGATACAAGGAGACGATCAGCCACGAATTCAATGTACTGGCACATGAGCTTCGCGTTCAT 416142 Query 868864 GCCGATGAGCG 868874 ||||||||||| Sbjct 416141 GCCGATGAGCG 416131 Score = 98.7 bits (108), Expect = 1e-14 Identities = 174/253 (69%), Gaps = 3/253 (1%) Strand=Plus/Minus Query 869633 GAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTTGG 869692 |||||||||||||| || |||||||| ||||| ||| | |||| || ||||| Sbjct 415665 GAGTGGATGTTCTCCATCATTATCTGGAAACCGTAGAAGCAGCGAGCCTCAGCGACTTGC 415606 Query 869693 ACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGAAA 869752 || || ||| ||| || || | ||||| ||| || ||||| || |||||||| Sbjct 415605 ACTTCGTTCGAGAAACGTTCGACGAGGTTTTCGTTGACAATGCCATCCGAAGCGGCGAAG 415546 Query 869753 AAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGC---GACACCCAGTGG 869809 ||||| || ||||| ||| ||||| |||||| | ||| | ||| ||||| Sbjct 415545 AAAGCGAGAACGTGAGAGATGAAGTGACGCTCGCCATCGTTCAGCTTGTTTGTCCAGTCA 415486 Query 869810 ACGGTGTCGGCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 | | || | || |||| |||||| || ||||||| || ||||| || || ||| Sbjct 415485 TGGATATCTTTGGAAAGATCCATCTCCTCAGCAGTCCAGAAGGAAGCCTCAGCTTTCTTG 415426 Query 869870 TACATCTCCCATA 869882 ||||| | ||||| Sbjct 415425 TACATTTGCCATA 415413 >seq2043 Length=178294 Score = 113 bits (124), Expect = 6e-19 Identities = 107/137 (78%), Gaps = 0/137 (0%) Strand=Plus/Plus Query 1627864 AACACGTCGGCGAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGG 1627923 ||| |||| |||||||| ||||| || | ||| || || |||||||||| |||||| | Sbjct 126513 AACGCGTCAGCGAGGCCTTGCACACCAATGCCGATGGGACGGTGGCGCATGTTCGACTTA 126572 Query 1627924 CGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTGCCCACCACG 1627983 || |||||||| || || |||| |||||||||||| | |||||||||||| | | ||| Sbjct 126573 CGCGCCTCGGGTACGGGATAGTAGTTGATGTCGATGATACGGTTGAGGTTGAACGCGACG 126632 Query 1627984 ACCTGGACGATCTCGTG 1628000 || | | ||| ||||| Sbjct 126633 ACTTTGGCGACGTCGTG 126649 Score = 89.7 bits (98), Expect = 6e-12 Identities = 108/146 (74%), Gaps = 1/146 (1%) Strand=Plus/Plus Query 1628448 CATA-AAGAGGTCACACGTCCACAGTGCGTAAAAGAGGTCGCGCGCCCGGTTCTCCTCCT 1628506 |||| || |||||| |||||| |||||| || | ||| || || || || |||| Sbjct 127126 CATACAAAAGGTCAGGGATCCACAATGCGTAGAACAAGTCACGAGCACGAGATTCTTCCT 127185 Query 1628507 TGCCGTGGTTCTTTTTGAGGTCGAGCCAGTCGACAATGTCGGCGTGCCACGGCTCCAGGT 1628566 | ||||||||||| | | |||||| |||||| | ||||||||||| ||||| |||| Sbjct 127186 TCCCGTGGTTCTTCCTCAAGTCGAGAAAGTCGAAGACATCGGCGTGCCATGGCTCGAGGT 127245 Query 1628567 AGCAGGCAAAGGCGCCCTTGCGCTTG 1628592 || ||||| ||||| ||||||| Sbjct 127246 AGATAGCAAATGCGCCAGGGCGCTTG 127271 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6106931658416693