Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_022098.1 Length=2473870 Score E Sequences producing significant alignments: (Bits) Value seq1750 145 1e-28 seq2043 105 1e-16 seq1840 87.8 3e-11 >seq1750 Length=1054334 Score = 145 bits (160), Expect = 1e-28 Identities = 232/328 (71%), Gaps = 5/328 (2%) Strand=Plus/Minus Query 794341 CCTTCGTCGCGACTGATCAATTCGTTGCT-AAAGCAGAGGCCGGGCATGAGGCCGCGCTT 794399 || ||||| |||||||| | |||||| |||| | || || ||||| || |||||||| Sbjct 415947 CCCTCGTCACGACTGATGAGCTCGTTGGAGAAAGTA-AGACCAGGCATAAGACCGCGCTT 415889 Query 794400 CTTGAGCCAAAAGATGGCACAGAAACTGCCCGAGAAAAAGATGCCCTCGACGGCGGCAAA 794459 ||| | ||| ||||| | ||| || ||||| ||||| |||||||| ||||| || Sbjct 415888 CTTCAACCAGAAGATAGAGGCGAATGAACCTGAGAAGAAGATACCCTCGACAGCGGCGAA 415829 Query 794460 GCCGACGAGCCGCTCGGCAAAAGTGTCCAGGCCCTCTTTGTTGATCCACTTCATCGCCCA 794519 | | ||||| ||||| ||||| |||| | | | || ||||| | ||||| Sbjct 415828 GGCAACGAGACGCTCAGCAAA--TGTCGATTGCTGGTCTGAA-ATCCATCGAAGAGCCCA 415772 Query 794520 CTCTGCCTTTTTCCTCACCGAGGGCACCGTGTCGATGGCGCGAAAGAGGTGGTCCTTCTC 794579 ||| ||||| | | | |||| | || ||||| ||| |||||||| ||| ||| Sbjct 415771 CTCGGCCTTGCGCTTGATACAGGGGATAGTTTCGATAGCGTCAAAGAGGTAGTCGCGCTC 415712 Query 794580 GACCGGGTCCTTGACGTAGGTGTCGATGAGGAGCGAGTAGGTCTCTGAGTGGATGTTTTC 794639 | | ||||||| |||||||||||| | | || |||||||| ||||||||||| || Sbjct 415711 GGCAATATCCTTGATGTAGGTGTCGATCAACAATGAATAGGTCTCAGAGTGGATGTTCTC 415652 Query 794640 GATGGCGATCTGGAAGCCATAAAAGCAG 794667 || |||||||| || || |||||| Sbjct 415651 CATCATTATCTGGAAACCGTAGAAGCAG 415624 Score = 114 bits (126), Expect = 2e-19 Identities = 131/176 (74%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 793917 ACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAAC 793976 |||||| ||||| ||||| |||||||||| |||||||||| ||||| | ||| Sbjct 416296 ACGCGCTTTTCGAAGAAGTTCGTCTTGCCCTGCAGCGAGATCATGTCCATGAAGTCGAAG 416237 Query 793977 GGGTTGGCCGTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACG 794036 || || | || ||| ||| ||| || || || |||| || || || || ||| Sbjct 416236 GGATTCGTCGAATTGTACACCTTGTCGTTGCCAAGGGATACAAGGAGACGATCAGCCACG 416177 Query 794037 AATTCAATGTACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCAG 794092 ||||||||||||||||||||||| ||||||||||||||||||| ||||| || Sbjct 416176 AATTCAATGTACTGGCACATGAGCTTCGCGTTCATGCCGATGAGCGAGACGGGAAG 416121 Score = 102 bits (112), Expect = 1e-15 Identities = 122/166 (73%), Gaps = 0/166 (0%) Strand=Plus/Plus Query 793926 TCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATCAACTCCATCCACGGGAACGGGTTGGCC 793985 || || || ||||||||||||| | || |||| |||||| | ||| ||||||| Sbjct 413325 TCAAAGAAATTGGTCTTGCCCTGCATTGATATCATCTCCATGAAGTCGAAGGGGTTGGAG 413384 Query 793986 GTCAGGTAGTGCTTCTCGCACCCGAGCGACGCAAGCAGGCGGTCGGCGACGAATTCAATG 794045 | | |||| ||| | ||||| || | || ||||| |||||||| ||||||||| Sbjct 413385 GCTTGATAGTACTTTTGATTTCCGAGAGAAACGAGTAGGCGATCGGCGACAAATTCAATG 413444 Query 794046 TACTGGCACATGAGGGCGGCGTTCATGCCGATGAGCGCCACGGGCA 794091 ||||| ||||||||| |||||||| ||||| || || || |||| Sbjct 413445 TACTGACACATGAGGCTCGCGTTCATACCGATAAGGGCGACCGGCA 413490 >seq2043 Length=178294 Score = 105 bits (116), Expect = 1e-16 Identities = 90/111 (81%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 2070133 AACGCGTCGGCCAGGCCCTGCACGCCGACGCCCATCGGCCGGTGGCGCAGGTTCGAGTGC 2070192 |||||||| || ||||| ||||| || | ||| || || |||||||||| |||||| | Sbjct 126513 AACGCGTCAGCGAGGCCTTGCACACCAATGCCGATGGGACGGTGGCGCATGTTCGACTTA 126572 Query 2070193 CGGGCCTCGGGCACCGGGTAGTGGTTGATGTCGATCACGCGGTTGAGGTTG 2070243 || |||||||| || || |||| |||||||||||| | |||||||||||| Sbjct 126573 CGCGCCTCGGGTACGGGATAGTAGTTGATGTCGATGATACGGTTGAGGTTG 126623 >seq1840 Length=284908 Score = 87.8 bits (96), Expect = 3e-11 Identities = 110/151 (73%), Gaps = 0/151 (0%) Strand=Plus/Plus Query 431100 GGGCGCGAGGGTCTCGTCGACACGGCCGTCAAGACGGCCGAGACGGGCTACATCCAGCGT 431159 || || ||||||||| |||| || ||||||||||| ||||| ||||| |||||||||||| Sbjct 264703 GGTCGTGAGGGTCTCATCGATACTGCCGTCAAGACTGCCGAAACGGGTTACATCCAGCGT 264762 Query 431160 CGGTGCATCAAATCGATGGAGAGCCTGCAGATCAAGCGCGGCGGCCTCGTGCGCAACGCC 431219 || | |||| || ||||| | ||| || || ||| ||| | ||| || Sbjct 264763 CGTCTCGTCAAGGCGTTGGAGGATGTTCAGGTCTGCTACGACGGGACCGTCAGAAACTCC 264822 Query 431220 AACGGCGACATTGTCCAGTTTGCCTATGGCG 431250 |||||| || ||||||| | |||||||| Sbjct 264823 CTCGGCGATCTTATCCAGTTCGTCTATGGCG 264853 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7915977378735231