Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq1 87.8 1e-11 >seq1 Length=1328766 Score = 87.8 bits (96), Expect = 1e-11 Identities = 246/375 (66%), Gaps = 2/375 (1%) Strand=Plus/Minus Query 282182 ACAAGACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACT 282241 || ||||| || || ||||||||||| || | | ||| | || | || || | ||| Sbjct 1001425 ACGAGACGGTTGTCGAAATCTTCACCACCAAGATGAGTGTCACCAGCAGTGGCCTTGACT 1001366 Query 282242 TGGAAAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCA 282301 | ||| | || ||||| | | || || | ||||| ||||| ||||| | ||| Sbjct 1001365 TCGAAGATACCCTCTTCGATGGTCAGGAGGGAGACATCGAAAGTTCCTCCACCGAGATCG 1001306 Query 282302 AAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCA 282361 || || || || || || | || || |||||||| || || | ||||| Sbjct 1001305 AAGATCAGGACGTTGCGCTCGCCAACGACCTTCTTGTCAAGACCGTAGGCGATGGCAGCG 1001246 Query 282362 GCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTA 282421 || || || || || ||||| | | || |||||||| | || | || || || || Sbjct 1001245 GCGGTAGGCTCGTTGATAATACGGAGGACGTTAAGACCGGAGATGGTACCGGCGTCCTTG 1001186 Query 282422 GTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTT-AC 282480 ||||| |||| || |||||||| || || ||||| ||||| | |||||| | |||| || Sbjct 1001185 GTGGCCTGTCGCTGAGAATCGTTGAAGTAGGCAGGGACAGTGACAACGGCGT-TGTTGAC 1001127 Query 282481 TTCTTTTCCAATATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAAT 282540 | | | || | || || || || | ||||| || | || | ||| || || || Sbjct 1001126 TGTTGTGCCCAAGTAGGCCTCAGCAGTCTCCTTCATCTTGTTCAAGACCATGGACGAGAT 1001067 Query 282541 TTGTTCTGGAGAATA 282555 || ||| || || || Sbjct 1001066 TTCTTCGGGTGACTA 1001052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3740506236787554