Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq2481 161 2e-34 >seq2481 Length=1366164 Score = 161 bits (178), Expect = 2e-34 Identities = 172/227 (76%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 82584 CCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGAT 82643 ||||| | | ||| ||||| | ||| |||||||| || ||||| || || |||||||| Sbjct 516601 CCTCCGCGGAGACGGAGAACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCAGAA 516660 Query 82644 AGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGT 82703 ||| | | || ||||| ||||| || || || ||||| || | |||||||| ||||| Sbjct 516661 AGAGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGTTGATCGGGAGGA 516720 Query 82704 ATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACT 82763 ||||||||||| || |||||||| ||||| || || || || || || | || || Sbjct 516721 ATTCCTTCCTTGTCCTGAATCTTGGCTTTCACGTTATCGATGGTGTCGGAGGACTCGACC 516780 Query 82764 TCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || | ||| ||||||||||| ||||| ||||| || || |||||||| Sbjct 516781 TCGAGAGTGATCGTCTTGCCAGTCAAAGTCTTCACGAAGATCTGCAT 516827 Score = 125 bits (138), Expect = 1e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 82607 GTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACCGTCTTCTAGTTG 82666 ||||||||| || || ||||| || || |||||||| || | || || || || | || Sbjct 516168 GTGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGAGAGCGTCCTGCCATCCTCCAACTG 516227 Query 82667 TTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTTATCTTGAATCTT 82726 || ||||||||||| | | ||||| || || || || || |||||||| |||||||| Sbjct 516228 CTTGCCAGCAAAGATCAAGCGCTGTTGGTCAGGTGGGATCCCCTCCTTATCCTGAATCTT 516287 Query 82727 TGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTATCGTCTTGCCTGT 82786 || || ||||| || || || || | ||| ||||| | || || |||||||| || Sbjct 516288 GGCCTTGACATTGTCGATGGTGTCTGACGATTCAACTTCGAGGGTGATGGTCTTGCCCGT 516347 Query 82787 CAACGTCTTTACAAATATCTGCAT 82810 ||| ||||| || || || ||||| Sbjct 516348 CAAAGTCTTCACGAAGATTTGCAT 516371 Score = 120 bits (132), Expect = 6e-22 Identities = 164/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | || ||| || || | || ||||||||||| ||||| || ||||| || | Sbjct 516371 TACCACCACGCAGACGAAGGACGAGATGAAGAGTAGATTCCTTCTGAATGTTATAGTCCG 516430 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | | | | ||| || || | || |||||||| || || | | |||||| || || | Sbjct 516431 ACAATGTGCGACCATCCTCCAACTGCTTTCCAGCGAAAATCAAACGTTGTTGGTCAGGTG 516490 Query 82702 GTATTCCTTCCTTATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTA 82761 | ||||||||||| ||||| |||||||| || || || || || || || || || | Sbjct 516491 GAATTCCTTCCTTGTCTTGGATCTTTGCCTTAACGTTGTCGATTGTGTCGGAAGACTCAA 516550 Query 82762 CTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 | || | || || ||||| || || | ||||| ||||| |||||||| Sbjct 516551 CCTCGAGGGTGATAGTCTTTCCGGTGAGGGTCTTGACAAAGATCTGCAT 516599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981795386037331