Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq2467 127 2e-24 seq2476 123 2e-23 seq2481 102 8e-17 seq2468 82.4 7e-11 >seq2467 Length=211848 Score = 127 bits (140), Expect = 2e-24 Identities = 147/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| || | ||| |||||||||||||||||| Sbjct 155838 GTTGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCG 155779 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 || | ||||| ||||| || |||||||||||||| |||||||| |||||| ||| Sbjct 155778 GCAAAGATGAGGCGCTGTTGATCGGGAGGGATGCCCTCCTTGTCCTGGATCTTCGCCTTT 155719 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | |||||||| || ||| || || | ||||| ||| ||||| || || || Sbjct 155718 ACGTTGTCGATCGTGTCGGAGGACTCGACCTCCAGGGTGATGGTCTTGCCAGTAAGCGTC 155659 Query 133644 TTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 155658 TTCACGAAGATCTGCATG 155641 >seq2476 Length=877278 Score = 123 bits (136), Expect = 2e-23 Identities = 146/198 (74%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCCC 133523 || ||||| ||||| || ||||| || | ||| ||||||||| |||||||| Sbjct 851218 GTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCGTCCTCGAGTTGCTTGCCG 851159 Query 133524 GCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTTG 133583 ||| | ||||| ||||| ||||||||||||||||| |||||||| ||||| |||| Sbjct 851158 GCGAAGATGAGGCGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCCTGAATCTTCGCCTTG 851099 Query 133584 AGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGTT 133643 | | || | ||||| | | || || |||| ||||| ||| ||||| ||||| || Sbjct 851098 ACGTTATCGATGGTGTCCGATGATTCGACCTCGAGGGTGATGGTCTTGCCAGTCAGCGTC 851039 Query 133644 TTTACGAAAATCTGCATG 133661 || ||||| ||||||||| Sbjct 851038 TTAACGAAGATCTGCATG 851021 >seq2481 Length=1366164 Score = 102 bits (112), Expect = 8e-17 Identities = 143/198 (72%), Gaps = 2/198 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || ||||| ||||| || |||||||| | ||| | | | || ||||| |||||||| Sbjct 516631 GTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCA-TCTTCGAGTTGCTTGCC 516689 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| | || || ||||| || |||||||| || ||||||||||| ||||| || Sbjct 516690 GGCGAAGATAAGGCGCTGTTGATCGGGAGGAATTCCTTCCTTGTCCTGAATCTTGGCTTT 516749 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||||| || ||| || |||| |||| || ||||| |||| ||| Sbjct 516750 CACGTTATCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATCGTCTTGCCAGTCAAAGT 516809 Query 133643 TTTTACGAAAATCTGCAT 133660 || ||||| |||||||| Sbjct 516810 CTTCACGAAGATCTGCAT 516827 Score = 91.5 bits (100), Expect = 1e-13 Identities = 143/202 (71%), Gaps = 2/202 (1%) Strand=Plus/Plus Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522 || || || ||||| || || || || || ||| ||| | ||||| | |||||| || Sbjct 516403 GTAGATTCCTTCTGAATGTTATAGTCCGACAATGTGCGACCA-TCCTCCAACTGCTTTCC 516461 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 ||| |||| | || || ||||| || || || ||||||||||| ||||||| ||| Sbjct 516462 AGCGAAAATCAAACGTTGTTGGTCAGGTGGAATTCCTTCCTTGTCTTGGATCTTTGCCTT 516521 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | || | ||||||| | ||| || |||| ||||| || || ||||| || || Sbjct 516522 AACGTTGTCGATTGTGTCGGAAGACTCAACCTCGAGGGTGATAGTCTTTCCGGTGAGGGT 516581 Query 133643 TTTTACGAAAATCTGCATGGCT 133664 || || || ||||||||| || Sbjct 516582 CTTGACAAAGATCTGCATGCCT 516603 >seq2468 Length=587188 Score = 82.4 bits (90), Expect = 7e-11 Identities = 82/104 (79%), Gaps = 2/104 (2%) Strand=Plus/Plus Query 133455 AAATGTATGGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAG 133513 || || | ||||||||| ||||| || ||||| |||| || ||| | | | |||||||| Sbjct 315085 AAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTCAAGGTGCGGCCA-TCCTCGAG 315143 Query 133514 CTGCTTGCCCGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGC 133557 ||| ||||| ||| | ||||| |||||||| ||||| || |||| Sbjct 315144 CTGTTTGCCAGCGAAGATGAGGCGCTGCTGATCGGGGGGAATGC 315187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483405517859960