Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq2481 89.7 3e-13 >seq2481 Length=1366164 Score = 89.7 bits (98), Expect = 3e-13 Identities = 142/204 (70%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 33547 TGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGT 33606 || ||||| ||| || || ||||||||||| || || ||||| | || || | ||| Sbjct 516625 TGGAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCGAGTTGC 516684 Query 33607 TTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTC 33666 || ||||| || || | ||||| ||||| | || | ||||| ||||| ||| || Sbjct 516685 TTGCCGGCGAAGATAAGGCGCTGTTGATCGGGAGGAATTCCTTCCTTGTCCTGAATCTTG 516744 Query 33667 TGTTTCAACATAGTCACGGTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTT 33726 ||||| || | ||||||| || || || || | |||||||| || || || Sbjct 516745 GCTTTCACGTTATCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATCGTCTTGCCAGTC 516804 Query 33727 AACGTTTTTACAAAGATCTGCATA 33750 || || || || |||||||||||| Sbjct 516805 AAAGTCTTCACGAAGATCTGCATA 516828 Score = 86.0 bits (94), Expect = 4e-12 Identities = 158/229 (69%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 33522 ACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGA 33581 |||||| | || ||| | || | ||| ||||| || || || ||||| || || || Sbjct 516372 ACCACCACGCAGACGAAGGACGAGATGAAGAGTAGATTCCTTCTGAATGTTATAGTCCGA 516431 Query 33582 GAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGG 33641 | |||||| | || ||||| || ||||| || ||||||||||| || || || | || Sbjct 516432 CAATGTGCGACCATCCTCCAACTGCTTTCCAGCGAAAATCAAACGTTGTTGGTCAGGTGG 516491 Query 33642 CACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCA 33700 | ||||| ||||| || || || | ||| | ||| | |||||| || || | Sbjct 516492 AATTCCTTCCTTGTCTTGGATCTT-TGCCTTAACGTTGTCGATTGTGTCGGAAGACTCAA 516550 Query 33701 CGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 | || | ||||| || || || || | || || |||||||||||||| Sbjct 516551 CCTCGAGGGTGATAGTCTTTCCGGTGAGGGTCTTGACAAAGATCTGCAT 516599 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 328693868623680