Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq2481 89.7 5e-13 seq2468 84.2 2e-11 >seq2481 Length=1366164 Score = 89.7 bits (98), Expect = 5e-13 Identities = 136/194 (70%), Gaps = 0/194 (0%) Strand=Plus/Plus Query 131930 GACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCGAGCTGTTTACCGGAA 131989 ||||| || || |||||||| || | || || ||||||||| || || |||| Sbjct 516634 GACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCGAGTTGCTTGCCGGCG 516693 Query 131990 TAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTAATTTTTTGTTTCAAC 132049 |||| || ||||||||||| ||||| || ||||| || || ||| || ||||| Sbjct 516694 AAGATAAGGCGCTGTTGATCGGGAGGAATTCCTTCCTTGTCCTGAATCTTGGCTTTCACG 516753 Query 132050 TGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTACCAGTCAGAGTTTTT 132109 | || | || |||| | ||| || |||| || | ||| || ||||||| ||| || Sbjct 516754 TTATCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATCGTCTTGCCAGTCAAAGTCTTC 516813 Query 132110 ATGAAAATCTGCAT 132123 | ||| |||||||| Sbjct 516814 ACGAAGATCTGCAT 516827 >seq2468 Length=587188 Score = 84.2 bits (92), Expect = 2e-11 Identities = 90/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 131902 ACGCAAGCGCAAAACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGT 131961 ||| | ||| | ||||| || | | | ||||| || ||||||||||||||||||| ||| Sbjct 315069 ACGGAGGCGGAGCACCAAGTGAAGGGTGGACTCCTTCTGAATGTTGTAGTCGCTCAAGGT 315128 Query 131962 ACGCGAATCTTCGAGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGC 132020 || ||| ||||||||||| || | |||| || ||||| ||||| || || |||| Sbjct 315129 GCGGCCATCCTCGAGCTGTTTGCCAGCGAAGATGAGGCGCTGCTGATCGGGGGGAATGC 315187 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476596133128440