Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_026440.1 Length=2243109 Score E Sequences producing significant alignments: (Bits) Value seq1750 217 2e-50 >seq1750 Length=1054334 Score = 217 bits (240), Expect = 2e-50 Identities = 385/549 (70%), Gaps = 23/549 (4%) Strand=Plus/Plus Query 1455772 GCGGATATGGGAAATGTACCAAAAAGGCCGAGGCCTCCTTTTGGACCGCCGAGGAGGTCG 1455831 || ||||||| |||||||| | |||| | ||||| ||||| ||||| || |||||| | | Sbjct 415408 GCAGATATGGCAAATGTACAAGAAAG-CTGAGGCTTCCTTCTGGACTGCTGAGGAGATGG 415466 Query 1455832 ACCTCGGCGCCGACACGGTCCA---CTGGGTGTC---GCTGAGCGACGACGAGCGCCATT 1455885 | || | || | |||| |||| ||||| ||| | |||||| || | Sbjct 415467 ATCTTTCCAAAGATA---TCCATGACTGGACAAACAAGCTGAACGATGGCGAGCGTCACT 415523 Query 1455886 TCATCAAGCACGTCCTCGCCTTTTTTCGCCGCCAGCGATGGCATCGTGGCCGAGAACCTG 1455945 ||||| ||||| ||||| ||| |||||||| |||||||| || ||| ||||| Sbjct 415524 TCATCTCTCACGTTCTCGC-TTTCTTCGCCGCTTCGGATGGCATTGTCAACGAAAACCTC 415582 Query 1455946 GCCGGCCGCTTTATGAAAGAGGTCCAATTGCCAGAGGCACGTTTGTTTTACGGGTTCCAG 1456005 | || || || ||| || || ||| | | ||||| || | || ||||| |||||| Sbjct 415583 GTCGAACGTTTCTCGAACGAAGTGCAAGTCGCTGAGGCTCGCTGCTTCTACGGTTTCCAG 415642 Query 1456006 ATCGCCATCGAAAACATCCACTCTGAAACCTACTCGCTCCTGATCGACACCTACGTCAAG 1456065 || || || |||||||||||||| ||||| || | |||||||||||||| ||||| Sbjct 415643 ATAATGATGGAGAACATCCACTCTGAGACCTATTCATTGTTGATCGACACCTACATCAAG 415702 Query 1456066 GACCCGGTCGAGAAGGACCACCTCTTTCGCGCCATCGACACGGTGCCGTCGGTGAGGAAA 1456125 || | |||| ||| |||||||| ||| ||||| || | || | | | | Sbjct 415703 GATATTGCCGAGCGCGACTACCTCTTTGACGCTATCGAAACTATCCCCTGTATCAAGCGC 415762 Query 1456126 AAGGCCGACTGGGCGATGAAGTGGA--TCA-ACAAGGAGGGCCTCGACACTTTGCCGAGC 1456182 |||||||| ||||| | |||| ||| || || | |||||| ||||| |||| Sbjct 415763 AAGGCCGAGTGGGCTCTTCGATGGATTTCAGACCAGCA----ATCGACA-TTTGCTGAGC 415817 Query 1456183 GGCTCGTCGGCTTTGCCGC-GTCGAGGGCATCTTTTTCTCGGGCAGTTTCTGCGCCATCT 1456241 | ||||| | ||| ||||| |||||||| ||||| ||||| || ||| | | |||| Sbjct 415818 GTCTCGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCAGGTTCATTCGCCTCTATCT 415877 Query 1456242 TTTGGCTCAAGAAGCGCGGCCTCATGCCCGGTCTT-CTGCTTTAGCAACGAATTTATCAG 1456300 | ||| | ||||||||||| || ||||| |||||| || || |||||| | ||||| Sbjct 415878 TCTGGTTGAAGAAGCGCGGTCTTATGCCTGGTCTTACT--TTCTCCAACGAGCTCATCAG 415935 Query 1456301 TCGCGACGA 1456309 ||| ||||| Sbjct 415936 TCGTGACGA 415944 Score = 96.9 bits (106), Expect = 5e-14 Identities = 125/169 (74%), Gaps = 3/169 (2%) Strand=Plus/Minus Query 1456572 TGCCGGTGGCGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGT 1456631 ||||||| || || ||||| |||||||| | | |||||||| |||||||||||| ||||| Sbjct 413490 TGCCGGTCGCCCTTATCGGTATGAACGCGAGC-CTCATGTGTCAGTACATTGAA-TTTGT 413433 Query 1456632 CGCCGACCGCCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGT 1456691 |||||| ||||| |||| | ||||| | ||| |||| | | ||||||| | Sbjct 413432 CGCCGATCGCCTACTCGTTTCTCTCGG-AAATCAAAAGTACTATCAAGCCTCCAACCCCT 413374 Query 1456692 TCCCATGGATGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGA 1456740 || | |||||| |||| || | ||||||||||||| || || || Sbjct 413373 TCGACTTCATGGAGATGATATCAATGCAGGGCAAGACCAATTTCTTTGA 413325 Score = 89.7 bits (98), Expect = 7e-12 Identities = 140/195 (72%), Gaps = 4/195 (2%) Strand=Plus/Plus Query 1456581 CGCTCATCGGCATGAACGCCACCGCTCATGTGCCAGTACATTGAATTTTGTCGCCGACCG 1456640 ||||||||||||||||||| | |||||||||||||||||||||| || || || || || Sbjct 416131 CGCTCATCGGCATGAACGCGAA-GCTCATGTGCCAGTACATTGAA-TTCGTGGCTGATCG 416188 Query 1456641 CCTGCTCGCGGCGCTCGGCTGCGGAGAAGCACTACCGGACGGCCAACCCGTTCCCATGGA 1456700 || || | | || ||| | || ||| ||| || | || || ||| | | Sbjct 416189 TCTCCTTGTATCCCTTGGCAAC-GACAAGGTGTACAATTCGACGAATCCCTTCGACTTCA 416247 Query 1456701 TGGAGTTGATCTCGCTCGAGGGCAAGACCAACTTTTTCGAGCGCCGCGTGGC-GAGTACG 1456759 |||| |||||||||| |||||||||| ||||| ||||| ||||| | || ||| Sbjct 416248 TGGACATGATCTCGCTGCAGGGCAAGACGAACTTCTTCGAAAAGCGCGTCTCTGACTACT 416307 Query 1456760 CCAAGGCCGGCGTCA 1456774 | ||||| ||||| Sbjct 416308 CGAAGGCTAACGTCA 416322 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 7177567273301698