Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1750 159 5e-34 >seq1750 Length=1054334 Score = 159 bits (176), Expect = 5e-34 Identities = 378/569 (66%), Gaps = 8/569 (1%) Strand=Plus/Plus Query 39606 TAAACATTAAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAG 39665 |||||| | ||| ||||| || || | |||||||||||||| || | || || | Sbjct 413636 TAAACAAGAGGCAAGCGAATTCGGTGTGCATGCCCTCATCTCTACAGATGAGCTCATTGG 413695 Query 39666 AAAATGTGAGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATC 39725 | || || || ||||| | || |||||||| |||||||||||||| | ||| || |||| Sbjct 413696 AGAAGGTAAGGCCAGGTAGTAATCCACGCTTCTTGAGCCAAAATATTGAAGCGAACGATC 413755 Query 39726 CAGAAAAGAAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTCTCCGTAACTTGTAT 39785 |||||||||| ||||| ||||| || || |||||||| || | | || || || Sbjct 413756 CAGAAAAGAATATGCCCTCTACGGCAGCGAATGCAACGAGGCGTACAGCG-AATGAAGAT 413814 Query 39786 CATT----ATGTATCCACTTCTGTGCCCAATCAGCTTTCTTCTTTACACAAGGCATTGTT 39841 | || | |||||| | ||||| || || || | ||| | ||| || || ||| Sbjct 413815 CGTTTGTCTTCTATCCATCGGAGAGCCCATTCTGCCTTTTGCTTGATACATGGTATGGTT 413874 Query 39842 TCTATAGCATTAAAGAGATAATGTTTTTCATCACTATCTTTAACATATGTATCTATTAAC 39901 || || |||| || || | || ||||| ||||| | ||| ||||| || | | Sbjct 413875 TCAATGGCATCGAATAGGTGCTGGCGTTCATTCGGCTCTTTGATATAGGTATCAATGAGC 413934 Query 39902 AGACTATACATTTCTGAATGGATGTTTTCAATCGCCATCTGAAATCCGTAAAAACATCTT 39961 | | ||| | || ||||| || ||||| ||| || || |||||||| ||||| | Sbjct 413935 ATAGAATAGGTCTCCGAATGTATATTTTCCATCATTATTTGGAATCCGTAGAAACAGCGC 413994 Query 39962 GCTTCAGTAATTTGTACCTCTGAACAAAATCTTTCCGCCAAATTTTCATTCACTATTCCA 40021 ||||| | | ||| || || | || | ||| | | || ||||| || || ||| Sbjct 413995 GCTTCTGCGACTTGGACTTCGCTTGAGAAGCGTTCAACAAGGTTCTCATTGACGATGCCA 414054 Query 40022 TCACTAGCGGCAAAAAATGCCAATACATGTTTAATAAAATATTTTTCATCGGGTGTCAAT 40081 || || || || || || | | | || || || ||||||| || ||| Sbjct 414055 TCCGACGCCGCGAAGAAGGCGAGGATGCGGGAGATGAAGAATCGTTCATCGTCGGTTAAT 414114 Query 40082 ---TTATTCCAGTCATTGATATCTTTTGATATATCTACTTCTTCAGCTGTCCAAAACGAC 40138 ||||||||| | ||||| || | ||| | ||||| | |||||||| || Sbjct 414115 CGAAGATTCCAGTCCATCCAGTCTTTAGAGAGATCAATCTCTTCGACGGTCCAAAAAGAA 414174 Query 40139 GCCTCTGCCTTTTTGTACATGTTCCATAT 40167 |||| |||| |||||||| | |||||| Sbjct 414175 GCCTGCGCCTGCTTGTACATCTGCCATAT 414203 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686887085095560