Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq2467 102 7e-17 seq2481 95.1 1e-14 seq190 89.7 4e-13 >seq2467 Length=211848 Score = 102 bits (112), Expect = 7e-17 Identities = 163/233 (70%), Gaps = 1/233 (0%) Strand=Plus/Minus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | ||||| || | ||| | ||| || || || || || |||||||| Sbjct 155868 CCGCCGCGAAGACGCAAGACAAGATGGAGCGTTGACTCCTTCTGGATGTTGTAGTCCGAG 155809 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | |||| |||| |||||||| || ||||| | ||||| ||||||||||| || || Sbjct 155808 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGATCGGGAGGG 155749 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | ||||| || || |||||| || | | | || | ||||| | || || || Sbjct 155748 ATGCCCTCCTTGTCCTGGATCTTCGCCTTTACGTTGTCGATCGTGTCGGAGGACTCGACC 155689 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATAGCTGC 27253 || || || || | ||||| || || || ||||| ||||| ||||| ||||| Sbjct 155688 TCCAGGGTGATGGTCTTGCCAGTAAGCGTCTTCACGAAGATCTGCAT-GCTGC 155637 >seq2481 Length=1366164 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 27019 TGCCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGC 27078 |||||||||| | || | || | || | ||||| || || || || ||||| || Sbjct 516599 TGCCTCCGCGGAGACGGAGAACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCAG 516658 Query 27079 TCATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCG 27138 | |||| | |||||||| || || |||||| | || || ||||||||||| || | Sbjct 516659 AAAGAGTGCGGCCATCTTCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGTTGATCGGGAG 516718 Query 27139 GCACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAA 27198 | | || || || || |||||| ||||| | | || | ||||| | || || | Sbjct 516719 GAATTCCTTCCTTGTCCTGAATCTTGGCTTTCACGTTATCGATGGTGTCGGAGGACTCGA 516778 Query 27199 CTTCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCATA 27248 | || ||||| || | ||||| |||| ||| ||||| ||||| |||||| Sbjct 516779 CCTCGAGAGTGATCGTCTTGCCAGTCAAAGTCTTCACGAAGATCTGCATA 516828 >seq190 Length=61660 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27021 CCTCCGCGCAACCGCAATACCAAATGTAACGTAGAGTCTTTTTGAATATTGTAGTCGCTC 27080 || ||||| | || | || | ||| | ||| || || || |||||||||||||| Sbjct 9946 CCACCGCGAAGACGGAGGACAAGATGGAGCGTCGACTCCTTCTGAATATTGTAGTCAGAA 10005 Query 27081 ATGTTGCGCTCGTCTTCGAGCTGTTTACCGGCGTAAATGAGACGCTGTTGATCCGGCGGC 27140 | | || | || ||||| ||||| |||||| | ||||||||||| || | || || Sbjct 10006 AGAGTACGGCCATCCTCGAGTTGTTTGCCGGCGAAGATGAGACGCTGCTGGTTGGGAGGG 10065 Query 27141 ACACCCTCTTTATCGGCGATCTTGTTTTTCAGGGTTTCTACAGTGTCTGTGGCTTCAACT 27200 | |||||| || || ||||| || | | || | ||||| | || |||||| Sbjct 10066 ATACCCTCCTTGTCCTGAATCTTCGCCTTGACATTATCGATGGTGTCCGAGGACTCAACT 10125 Query 27201 TCTAGAGTTATAGATTTGCCCGTCAGAGTTTTCACAAAGATTTGCAT 27247 || ||||| || | ||||| || || || ||||| ||||| ||||| Sbjct 10126 TCGAGAGTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 10172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424921302592248