Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq1750 87.8 2e-12 seq2481 84.2 3e-11 >seq1750 Length=1054334 Score = 87.8 bits (96), Expect = 2e-12 Identities = 145/207 (70%), Gaps = 2/207 (1%) Strand=Plus/Minus Query 122692 ATAAGTTCATTTGAGAAGCATAGACCTGGCATGAGACCCCGCTTCTTCAACCAATAAATA 122751 || || || || ||||| ||||| ||||| ||||| |||||||||||||| | ||| Sbjct 415932 ATGAGCTCGTTGGAGAAAGTAAGACCAGGCATAAGACCGCGCTTCTTCAACCAGAAGATA 415873 Query 122752 GCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACACGCAAACGCAAAAAGGCGTTCG 122811 | | |||||| || ||||||||||||||||| ||| || || |||| || || || Sbjct 415872 GAGGCGAATGAACCTGAGAAGAAGATACCCTCGACAGCGGCGAAGGCAACGAGACGCTCA 415813 Query 122812 GCGAAGGAGCGAGACTTTGCATCAAA-CCATTTCATTGCCCATTTCGCCTTCTTCTCAAT 122870 || || | ||| | | | ||| |||| | ||||| | ||||| || || Sbjct 415812 GCAAATG-TCGATTGCTGGTCTGAAATCCATCGAAGAGCCCACTCGGCCTTGCGCTTGAT 415754 Query 122871 ACATGGTACAGTTTGGATGGCTTCAAA 122897 ||| || | ||||| ||| || ||||| Sbjct 415753 ACAGGGGATAGTTTCGATAGCGTCAAA 415727 >seq2481 Length=1366164 Score = 84.2 bits (92), Expect = 3e-11 Identities = 187/278 (67%), Gaps = 2/278 (1%) Strand=Plus/Minus Query 11682 CAAAGAGATCGCGAACCCTTTTGGCACCCACACCAACAAACATCTCCACAAAGTTTGCGG 11741 |||||||||| || ||||| | ||| || ||||| ||||||||||| || | | Sbjct 1214387 CAAAGAGATCTCGCACCCTGGAAGAACCGACGCCAACGAACATCTCCACGAATTCAGAAC 1214328 Query 11742 CAGAGCACTG-GATGAATGGGACATTTGATTCACCCGCGATGGCTCGGGCGAGGAGGGTC 11800 ||||| || | || ||| |||||||| | ||| |||||| | || || || || || Sbjct 1214327 CAGAG-ACGGAGAGGAAGGGGACATTGGCTTCGCCCGCGGTTGCCTTCGCAAGTAGAGTT 1214269 Query 11801 TTTCCCGTACCTGGCTTACCCGCGAGAAGGGCGCCTCGGGGGATCTTGGCACCACTTCCA 11860 || || || || || || | ||| | ||| ||||| |||||||| |||||| | Sbjct 1214268 TTACCAGTTCCAGGTGGTCCAGAGAGGATGGCCCCTCGCGGGATCTTTGCACCAAGTTTC 1214209 Query 11861 AAATATCTCTCGGGTTGCTTGAGAAAATCCACAATCTCTTCAAGTTCATCTTTGGCCGCG 11920 || || |||| | ||| || || | || | ||| | || || || ||| | Sbjct 1214208 TCGTACTTCGCGGGATCCTTCAGGAACTGAACGAACTCCATGACCTCTTCCTTTGCCTCA 1214149 Query 11921 TCAATCCCCTCAACATCACTGAAGCGGGTTTTAATCTC 11958 || || || | ||||| ||||| ||| |||| | ||| Sbjct 1214148 TCCATGCCAGCGACATCCCTGAACCGGATTTTGACCTC 1214111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628012146338400