Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_028092.1 Length=193301 Score E Sequences producing significant alignments: (Bits) Value seq1750 129 7e-25 seq2248 87.8 2e-12 >seq1750 Length=1054334 Score = 129 bits (142), Expect = 7e-25 Identities = 165/225 (73%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 130034 CCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCCCGCTTC 130093 ||||||||||| |||||| || || ||||| ||||| ||||| ||||| |||||| Sbjct 415947 CCCTCGTCACGACTGATGAGCTCGTTGGAGAAAGTAAGACCAGGCATAAGACCGCGCTTC 415888 Query 130094 TTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACACGCGAAC 130153 ||||||||||| || | ||||| || ||||||||||| ||||| ||| ||||| Sbjct 415887 TTCAACCAGAAGATAGAGGCGAATGAACCTGAGAAGAAGATACCCTCGACAGCGGCGAAG 415828 Query 130154 GCAAAGAGACGCTCAGCAAAGGAGCGGGACTTTGTATCAAA-CCACTTCATCGCCCACTG 130212 |||| ||||||||||||||| | || | || | ||| ||| | ||||||| Sbjct 415827 GCAACGAGACGCTCAGCAAATG-TCGATTGCTGGTCTGAAATCCATCGAAGAGCCCACTC 415769 Query 130213 CGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAG 130257 ||||| || |||||| |||| || | ||| || |||||||| Sbjct 415768 GGCCTTGCGCTTGATACAGGGGATAGTTTCGATAGCGTCAAAGAG 415724 >seq2248 Length=795099 Score = 87.8 bits (96), Expect = 2e-12 Identities = 211/315 (67%), Gaps = 12/315 (4%) Strand=Plus/Minus Query 179808 ATCCGTCATAATCATAAGCCGACCATAGCGAAGCTCGGAAACATCTTGATAATCCTTACC 179867 ||| ||||| ||||| | ||||| || | || ||| || | ||| |||||| Sbjct 661225 ATCTGTCATGATCATCAATCGACCGTATCTCAGGCTGGAGACGTTGGTATACTCCTTATT 661166 Query 179868 TTGTTGAAGACCCAAGATCTTCTTGAGATCATTGAACTCTTGGTT-----TGATGTGAGT 179922 ||||| ||||||| ||||||||||| | | || ||| | ||| |||| || || Sbjct 661165 GTGTTGTAGACCCATGATCTTCTTGATGTTTTGGATCTCCTCGTTCTTCATGATCTG-GT 661107 Query 179923 TGCGCCACTGAAGCATCTCGGACATTTTTACACTTCCCACGGAGAGGGAACACACCGTAG 179982 ||| | || || || ||||| | || || || |||||||| || || || Sbjct 661106 CATGCCTC----GCCTCCCGTACATTGAGTAATTTACCTCGAAGAGGGAAGACGCCAAAG 661051 Query 179983 TGATCACGACCAACCACAGAGAGACCAGCAACTGCGAGGGTCTTCGCGGAATCACCCTCC 180042 | || |||||||| || | | |||||| ||||| |||| || ||||| ||||| || Sbjct 661050 TTGTCGCGACCAACAACGGCCAAACCAGCGACTGCCAGGGATTTGGCGGAGTCACCTTCG 660991 Query 180043 GTCACGATGAGCGTACACTT-TCCAGATTGTGCCGTCCCTGCCTTGTTCGCGTCGTCCAA 180101 || | |||||| || || || || ||| | || || || ||||| ||||| | Sbjct 660990 GTAAGGATGAGAGTGCATTTCTCTGCATTCT-TGGTGCCGGCGTTGTTGGCGTCAGAGAG 660932 Query 180102 CTTGGGAATACCAGT 180116 ||||| || ||||| Sbjct 660931 CTTGGCCATGCCAGT 660917 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 618415649717240