Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1750 129 7e-25 seq2248 104 3e-17 seq1 84.2 3e-11 >seq1750 Length=1054334 Score = 129 bits (142), Expect = 7e-25 Identities = 192/267 (72%), Gaps = 8/267 (3%) Strand=Plus/Plus Query 94675 ATAGACAAGTATATTAAGGATGGTGCTGAGAAGAAGCAGCTCTTTGAAGCCATCCAAACA 94734 || |||| || || |||||| ||| ||| | | |||||||| || ||| |||| Sbjct 415685 ATCGACACCTACATCAAGGATATTGCCGAGCGCGACTACCTCTTTGACGCTATCGAAACT 415744 Query 94735 GTTCCGTGTATTCAAAAGAAAG-CGGATTGGGCTATGAAGTGG-TTTGATACAA--AGTC 94790 | || ||||| ||| | ||| | || |||||| | ||| ||| | || | | || Sbjct 415745 ATCCCCTGTAT-CAAGCGCAAGGCCGAGTGGGCTCTTCGATGGATTTCAGACCAGCAATC 415803 Query 94791 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850 | | ||||||||||| ||| | || || || ||| ||||||||||||||||| || Sbjct 415804 GA---CATTTGCTGAGCGTCTCGTTGCCTTCGCCGCTGTCGAGGGTATCTTCTTCTCAGG 415860 Query 94851 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 94910 ||| ||| | |||| | ||| | |||||||| ||||| ||||| ||||| ||||| Sbjct 415861 TTCATTCGCCTCTATCTTCTGGTTGAAGAAGCGCGGTCTTATGCCTGGTCTTACTTTCTC 415920 Query 94911 CAACGAGCTTATCTCTCGTGACGAGGG 94937 ||||||||| ||| |||||||||||| Sbjct 415921 CAACGAGCTCATCAGTCGTGACGAGGG 415947 >seq2248 Length=795099 Score = 104 bits (114), Expect = 3e-17 Identities = 178/256 (70%), Gaps = 2/256 (1%) Strand=Plus/Minus Query 169201 ATCCGTCATGATCATGAGACGACCATACCGAAGCTCGGAAACATCTTGATAGTCCTTACC 169260 ||| ||||||||||| | ||||| || | || ||| || | ||| |||||| Sbjct 661225 ATCTGTCATGATCATCAATCGACCGTATCTCAGGCTGGAGACGTTGGTATACTCCTTATT 661166 Query 169261 CTGTTGAAGACCCAAGATCTTCTTGAGATCGTTGAACTCTTGGTTTGATGTGAGCTGTGT 169320 ||||| ||||||| ||||||||||| | | || ||| | ||| ||| ||| || Sbjct 661165 GTGTTGTAGACCCATGATCTTCTTGATGTTTTGGATCTCCTCGTTCTTCATGATCTG-GT 661107 Query 169321 GACAGAG-GCATCGCGAACATTCTTACACTTCCCACGAAGAGGGAAGACACCGTAGTGAT 169379 | || || || ||||| | || || |||||||||||||| || ||| | Sbjct 661106 CATGCCTCGCCTCCCGTACATTGAGTAATTTACCTCGAAGAGGGAAGACGCCAAAGTTGT 661047 Query 169380 CACGACCAACGACGGAGAGACCCGCGACTGCGAGAGTCTTCGCCGAGTCACCCTCGGTGA 169439 | |||||||| |||| | ||| |||||||| || | || || |||||||| ||||| | Sbjct 661046 CGCGACCAACAACGGCCAAACCAGCGACTGCCAGGGATTTGGCGGAGTCACCTTCGGTAA 660987 Query 169440 CGATGAGCGTACATTT 169455 |||||| || ||||| Sbjct 660986 GGATGAGAGTGCATTT 660971 >seq1 Length=1328766 Score = 84.2 bits (92), Expect = 3e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 9698 CCCACGGCATCAATCTCATCAATGAAGACGATGCATGGTTGATTTTCGCGAGCGACTTCA 9757 || |||||||||| || |||||||||| ||| ||||| || | ||||| | || Sbjct 1154094 CCGACGGCATCAAGTTCGTCAATGAAGATAATGGCAGGTTGCTTCTTCCGAGCCGCGGCA 1154153 Query 9758 AAGAGATCCCGTACACGCTTGGCGCCCACACCAACAAACATCTC 9801 ||||||||||| || || || || ||||||||||| |||||||| Sbjct 1154154 AAGAGATCCCGCACGCGTTTCGCACCCACACCAACGAACATCTC 1154197 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583242361667960