Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq2043 129 6e-25 seq1750 93.3 5e-14 >seq2043 Length=178294 Score = 129 bits (142), Expect = 6e-25 Identities = 289/426 (68%), Gaps = 16/426 (4%) Strand=Plus/Plus Query 78737 ACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCAT---GACTCGAGCAGGGCCGCGT 78793 |||||||||||| ||| |||| || || | |||||| | |||||| ||| | Sbjct 126382 ACGTCTCGTAAGCTCCTTCCTTCTCCGCCATTTCGCAGCTAGCCTCGAGACCGGCA---T 126438 Query 78794 GGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCGCGCCTTGGTCTCGTCGAACGAAA 78853 | || | || ||| ||||| || ||| | ||| | || || | ||||| | | Sbjct 126439 GATAGATAGTCTCAAAGATTTGCTGGTTCAACTCTCTGGCAGCGGGCGAATCGAAGGGGA 126498 Query 78854 GGCCGAGCATCATGAAGACATCGGCCAGGCCCTGGACGCCGATAGCGATCGGTCGGTGGC 78913 |||||| |||||| | || || ||||| || || || || |||| || ||||||| Sbjct 126499 TGCCGAGAGCCATGAACGCGTCAGCGAGGCCTTGCACACCAATGCCGATGGGACGGTGGC 126558 Query 78914 GCATGTTGCTCTTTCGGGCCGCCTCGG--TCGGG-TAAAAGTTCCGATCGATGACGCGGT 78970 ||||||| ||| || |||||||| |||| || |||| ||||||| |||| Sbjct 126559 GCATGTTCGACTTACG---CGCCTCGGGTACGGGATAGTAGTTGATGTCGATGATACGGT 126615 Query 78971 TCAGGTTACGCGTGACGACCCGAGTCACCTCGTACAATTTGGCGAAATCAAAATGATTTC 79030 | ||||| || |||||| | || |||| || || ||| | ||| | | Sbjct 126616 TGAGGTTGAACGCGACGACTTTGGCGACGTCGTGTAACTTCTGGAAGT-TGTATG-TACC 126673 Query 79031 CTT--TGATGAAAGTCGGTAGGCACAGCGATGCCAGGTTGCACACGGCCGTCTCGTCCGG 79088 ||| |||||||| ||| || || || || |||||||| || || ||||||||||| Sbjct 126674 CTTGGAGATGAAAGACGGGAGTGCGAGGGACGCTAGGTTGCAAACAGCAGTCTCGTCCGG 126733 Query 79089 GCTAGAAACCTCGATGATTTCTGTGCACAAATTAGACGACTTGATGGTGCCGATGTTCTT 79148 || ||||||||| || ||||| | ||| || |||||||||||||||| |||| Sbjct 126734 CGAGGAGTACTCGATGATCTCCGTGCAAAGATTGGAGGACTTGATGGTGCCGAGATTCTG 126793 Query 79149 CTGGTT 79154 ||||| Sbjct 126794 TTGGTT 126799 Score = 125 bits (138), Expect = 8e-24 Identities = 236/340 (69%), Gaps = 14/340 (4%) Strand=Plus/Minus Query 19829 GACGCCGCGAACGC---CAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCCAAC 19885 |||||||| | ||| ||| || || || |||| ||||| | |||||||| ||||| Sbjct 126822 GACGCCGC-ATCGCAGGCAAATCTAACCAACAGAATCTCGGCACCATCAAGTCCTCCAAT 126764 Query 19886 CTGTGTACTGAAATCATGGAGGTTTCCAAGCCGGACGAGACTGCCGTGTGTAATCTGGCG 19945 || || || || ||||| ||| ||| ||||||||||||||| || || || || ||| Sbjct 126763 CTTTGCACGGAGATCATCGAGTACTCCTCGCCGGACGAGACTGCTGTTTGCAACCTAGCG 126704 Query 19946 TCCCTGTGCCTGCCGACTTTCGT---CAAGGCCTCCTCCTTCGACTTTGCCAAATTGTAC 20002 ||||| || ||| ||||| | ||||| | | | |||| || || || Sbjct 126703 TCCCTCGCACTCCCGTCTTTCATCTCCAAGG---GTACATACAACTTCCAGAAGTTACAC 126647 Query 20003 GAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTTTA-CCC 20061 || || || |||||| || || || || || ||||||| |||| || ||| Sbjct 126646 GACGTCGCCAAAGTCGTCGCGTTCAACCTCAACCGTATCATCGACATCAACTACTATCCC 126587 Query 20062 G-ACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTCCAGG 20120 | ||| | |||||| |||||||| ||||||||||| || |||| || || || || | Sbjct 126586 GTACC--CGAGGCGCGTAAGTCGAACATGCGCCACCGTCCCATCGGCATTGGTGTGCAAG 126529 Query 20121 GCCTGGCCGACGTTTTCATGATGCTCGGCCTCTCATTCGA 20160 |||| || |||| |||||| |||||| || | ||||| Sbjct 126528 GCCTCGCTGACGCGTTCATGGCTCTCGGCATCCCCTTCGA 126489 Score = 102 bits (112), Expect = 9e-17 Identities = 145/202 (72%), Gaps = 8/202 (4%) Strand=Plus/Plus Query 78186 GCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCAT 78245 ||| ||||| | |||||||| |||||||| |||||||||||||| ||||| | |||||| Sbjct 125764 GCGCGTTCGGAGGTAGTACATCCCCGTCTTCAGACCCTTCTTCCAGCCGTAGAAGTGCAT 125823 Query 78246 ACTCGACAGCTTGGCCAGACTCGGGTTCTCCATGAA----GATGTTGAGCGACTGGGACT 78301 || | |||| | | ||| | || | || |||| ||||||||| |||| | Sbjct 125824 GCTAGTTAGCTGGCCTAGAGTAGG---CGCC-TGAAGATGGATGTTGAGACTCTGGCTTT 125879 Query 78302 GGTCGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCC 78361 | |||| |||| || |||||||| || | ||| | ||| ||| || ||||||| Sbjct 125880 GACAGATGAACGCTCCTCGGTCGGCGGCGAGGTCCAGCACCTTCTTCTGACTGATCTCCC 125939 Query 78362 AGATGGTCCGGTAAATGGCCTT 78383 ||| |||| ||| || ||||| Sbjct 125940 AGACGGTCTTGTAGATAGCCTT 125961 Score = 95.1 bits (104), Expect = 1e-14 Identities = 140/195 (72%), Gaps = 10/195 (5%) Strand=Plus/Plus Query 79699 GTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACCAGGAAGCA-GCTCGACAT 79757 || |||||||| || || || |||||||||||||| ||||| |||||| | | | | Sbjct 127494 GTGTCGTAGATTCCATCTATGGAGTCGTCCTTCATGCAGACCAAGAAGCACGAGCTA-AG 127552 Query 79758 CTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGTCGCGTGCGTGAAGAACTTTTG 79817 |||||||| | ||||| || ||||| || || || | |||||||||||| | | Sbjct 127553 CTGTGGGTGGGGAGTACCAGCATTGAACAGAGTAGGAGAAGCGTGCGTGAAG----TATC 127608 Query 79818 GCT----CATCAGATCGTACGTCTCCTTGACGCGCGGGAGGTCGTCGCCGTGGATGCCGA 79873 ||| ||| || | ||| ||||| ||||||| || || | ||||| ||||||| Sbjct 127609 GCTCCGACATGAGGTTGTATGTCTCGATGACGCGGTCGATATCAGCTCCGTGTATGCCGA 127668 Query 79874 CCGCGACGCGCATGA 79888 | || || ||||||| Sbjct 127669 CAGCCACACGCATGA 127683 >seq1750 Length=1054334 Score = 93.3 bits (102), Expect = 5e-14 Identities = 343/530 (65%), Gaps = 12/530 (2%) Strand=Plus/Plus Query 59593 TGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACC 59652 |||| |||||||| | ||| |||||| | | |||||||| || || || ||| Sbjct 415422 TGTACAAGAAAGCTGAGGCTTCCTTCTGGACTGCTGAGGAGATGGATCTTTCCAAAGATA 415481 Query 59653 TGAAGGATTGGG---ACAAGCTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGG 59709 | | || ||| ||||||| || | | ||||| || |||||| || || | Sbjct 415482 TCCATGACTGGACAAACAAGCTGAACGATGGCGAGCGTCACTTCATCTCTCACGTTCTCG 415541 Query 59710 CCTTCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTCC--AA 59767 | |||||||| || ||||| ||||| | ||||| | | | |||| |||| || Sbjct 415542 CTTTCTTCGCCGCTTCGGATGGCATTGTCAACGAAAACCTCGTC--GAACGTTTCTCGAA 415599 Query 59768 GGATGTCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAGTCGTTCAACGAGTCTAT 59827 || || || | || ||||| || | ||||||| | ||| | | ||| || Sbjct 415600 CGAAGTGCAAGTCGCTGAGGCTCGCTGCTTCTACGGTTTCCAGATAATGATGGAGAACAT 415659 Query 59828 CCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGC 59887 |||||| ||||| || || | ||||||| | | |||||||| | ||| | Sbjct 415660 CCACTCTGAGACCTATTCATTGTTGATCGACACCTACATCAAGGATATTGCCGAGCGCGA 415719 Query 59888 TGGTCTGTTCCGTGCCATAGAGACG-TCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCA 59946 || || || || || || ||||| | | | || | || || || ||||| Sbjct 415720 CTACCTCTTTGACGCTATCGAAACTATCCCCTGTA-TCAAGCGCAAGGCCGAGTGGGCTC 415778 Query 59947 TGCAGTGGATG--AGTCCTGGAG-CATCATTTGCACAACGTCTCATAGCTTTTGCATGCG 60003 | | ||||| || || | | | ||||||| | |||||| | || || || | Sbjct 415779 TTCGATGGATTTCAGACCAGCAATCGACATTTGCTGAGCGTCTCGTTGCCTTCGCCGCTG 415838 Query 60004 TGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCC 60063 | || || ||||||||||| || || ||| |||| |||||| | || ||||| || | Sbjct 415839 TCGAGGGTATCTTCTTCTCAGGTTCATTCGCCTCTATCTTCTGGTTGAAGAAGCGCGGTC 415898 Query 60064 TCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGC 60113 | ||||| || || | ||||||||||||||| || || ||||||||| Sbjct 415899 TTATGCCTGGTCTTACTTTCTCCAACGAGCTCATCAGTCGTGACGAGGGC 415948 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548507459759760