Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_028110.1 Length=171045 Score E Sequences producing significant alignments: (Bits) Value seq1750 116 4e-21 seq2248 84.2 2e-11 >seq1750 Length=1054334 Score = 116 bits (128), Expect = 4e-21 Identities = 295/442 (67%), Gaps = 19/442 (4%) Strand=Plus/Minus Query 74790 TCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTTCTTCAACCAAAAGATGGCACAG 74849 || || || || | ||| ||||||||||| || |||||||||||||| ||||| | | Sbjct 415926 TCGTTGGAGAAAGTAAGACCAGGCATAAGACCGCGCTTCTTCAACCAGAAGATAGAGGCG 415867 Query 74850 AAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAAGGCGACAAGGCGTTGCGCGAAC 74909 || ||||| ||||||||| || |||||| || ||||| || || || | || || Sbjct 415866 AATGAACCTGAGAAGAAGATACCCTCGACAGCGGCGAAGGCAACGAGACGCTCAGCAAAT 415807 Query 74910 G----GTGC--ATCGGAAGT-CATCCAAGTCTGAGCCCATTCAGCTTTTCGTTTGACCGC 74962 | ||| || ||| | |||| || ||||||| || || || || |||| Sbjct 415806 GTCGATTGCTGGTCTGAAATCCATCGAA----GAGCCCACTCGGCCTTGCGCTTGATACA 415751 Query 74963 AGGGACAGTATCGATCGCTTGGAAGAGGCTTGCCTTCTCTTCGGGATCCTTGACGAGCTT 75022 |||| ||| ||||| || | |||||| | ||| | |||||||| | | Sbjct 415750 GGGGATAGTTTCGATAGCGTCAAAGAGGTAGTCGCGCTCGGCAATATCCTTGATGTAGGT 415691 Query 75023 GTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTCGTTGAACGACTGGTACGCGTA 75082 ||| |||| | ||| || ||||| || || || ||| | | |||| | |||| Sbjct 415690 GTCGATCAACAATGAATAGGTCTCAGAGTGGATGTTCTCCATCATTATCTGGAAACCGTA 415631 Query 75083 GAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAAA--TTCATGTCGATATTCTCC 75140 ||| | || ||||| || | || || || || || ||| ||| | ||| || || Sbjct 415630 GAAGCAGCGAGCCTCAGCGACTTGCACTTCGTTCGAGAAACGTTC--GACGAGGTTTTCG 415573 Query 75141 ATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACCATTTTGATAAAGTGGCGCT-- 75198 |||| ||||| ||||| |||||||| ||||| || || ||| ||||| |||| Sbjct 415572 TTGACAATGCCATCCGAAGCGGCGAAGAAAGCGAGAACGTGAGAGATGAAGTGACGCTCG 415513 Query 75199 -CATCG-TCAGTGAGTTTGTCC 75218 ||||| |||| |||||||| Sbjct 415512 CCATCGTTCAGCTTGTTTGTCC 415491 Score = 91.5 bits (100), Expect = 2e-13 Identities = 331/510 (65%), Gaps = 16/510 (3%) Strand=Plus/Plus Query 74768 GCCTTCATCTCTGCTTATCAATTCATTCGAAAACGAAAGGCCAGGCATAAGTCCACGCTT 74827 ||| |||||||| | || | ||||| || || | ||||||||| | | ||||||||| Sbjct 413667 GCCCTCATCTCTACAGATGAGCTCATTGGAGAAGGTAAGGCCAGGTAGTAATCCACGCTT 413726 Query 74828 CTTCAACCAAAAGATGGCACAGAAGGAACCACTGAAGAAGATGCCTTCGACACACGCAAA 74887 ||| | |||||| || | | ||| || ||| ||||| ||||| || || || || Sbjct 413727 CTTGAGCCAAAATATTGAAGCGAACGATCCAGAAAAGAATATGCCCTCTACGGCAGCGAA 413786 Query 74888 GGCGACAAGGCGTTGCGCGAACGGTGCATCGGAAGTC----ATCCAAGTCTGAGCCCATT 74943 || || |||||| ||||| | | |||| ||| ||||| ||||||||| Sbjct 413787 TGCAACGAGGCGTACAGCGAATGAAG-ATCGTTTGTCTTCTATCCATCGGAGAGCCCATT 413845 Query 74944 CAGCTTTTCGTTTGACCGCAGGGACAGTATCGATCGCTTGGAAGAG--GCTTGCCTTCTC 75001 | || ||| | |||| || | || || || || | ||| || ||| || ||| Sbjct 413846 CTGCCTTTTGCTTGATACATGGTATGGTTTCAATGGCATCGAATAGGTGCTGGCGTTC-A 413904 Query 75002 TTCGGGATCCTTGACGAGCTTGTCAATCATAAGTGAGTACGTCTCCGAATGAATCGACTC 75061 ||| || || |||| | ||||| | | || || ||||||||||| || || Sbjct 413905 TTC-GGCTCTTTGATATAGGTATCAATGAGCATAGAATAGGTCTCCGAATGTATATTTTC 413963 Query 75062 GTTGAACGACTGGTACGCGTAGAAAGACCGCGCCTCTGCAATCTGTACATCCTTTGAAAA 75121 | | ||| | |||||||| | ||||| ||||| | || || || |||| || Sbjct 413964 CATCATTATTTGGAATCCGTAGAAACAGCGCGCTTCTGCGACTTGGACTTCGCTTGAGAA 414023 Query 75122 --ATTCATGTCGATATTCTCCATGACGATGCCGTCCGAGGCGGCGAAAAAAGCCAGTACC 75179 |||| | | ||||| |||||||||| ||||| || ||||| || || || | Sbjct 414024 GCGTTCA--ACAAGGTTCTCATTGACGATGCCATCCGACGCCGCGAAGAAGGCGAGGATG 414081 Query 75180 ATTTTGATAAAGTGGCGCTCATCGTCAGTGA---GTTTGTCCCAATCCTTCAGGTCCCCC 75236 ||| ||| || |||||||| || | | | ||| ||| || ||| Sbjct 414082 CGGGAGATGAAGAATCGTTCATCGTCGGTTAATCGAAGATTCCAGTCCATCCAGTCTTTA 414141 Query 75237 GCCAAATCAATCTCCTCGACCGTCCAGAAA 75266 | | ||||||||| ||||| ||||| ||| Sbjct 414142 GAGAGATCAATCTCTTCGACGGTCCAAAAA 414171 >seq2248 Length=795099 Score = 84.2 bits (92), Expect = 2e-11 Identities = 174/254 (69%), Gaps = 4/254 (2%) Strand=Plus/Minus Query 118045 ATCGGTCATGATCATCAGGCGGCCGTACCGTAAATCT-CTCAGGGAGTTATAAACCTTAC 118103 ||| ||||||||||||| || ||||| | | | || | | | |||| ||||| Sbjct 661225 ATCTGTCATGATCATCAATCGACCGTATC-TCAGGCTGGAGACGTTGGTATACTCCTTAT 661167 Query 118104 CATGTTGGAGCCCGAGGATCTTTTTAAGGTTGGAAAATTCCTCATTTTCCGTCACCTGTT 118163 ||||| || || | |||||| || | ||| | ||||| || | | | | ||| Sbjct 661166 TGTGTTGTAGACCCATGATCTTCTTGATGTTTTGGATCTCCTCGTTCTTCATGATCTG-G 661108 Query 118164 TTATG-GTGGCGTCCCGAACGTTGCGCGGCTTACCCCGCAGTGGAAACACGCCAAACTTG 118222 | ||| | || ||||| || ||| | ||||| || || || || |||||||| ||| Sbjct 661107 TCATGCCTCGCCTCCCGTACATTGAGTAATTTACCTCGAAGAGGGAAGACGCCAAAGTTG 661048 Query 118223 TCACGGCCCACAACGCTCAAGCCGGCAATAGCAAGGGCCTTCGCCGAGTCACCCTCGGTA 118282 || || || |||||| ||| || || | || |||| || || |||||||| |||||| Sbjct 661047 TCGCGACCAACAACGGCCAAACCAGCGACTGCCAGGGATTTGGCGGAGTCACCTTCGGTA 660988 Query 118283 ATAATAAGAGTGCA 118296 | || |||||||| Sbjct 660987 AGGATGAGAGTGCA 660974 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547198701134200