Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq2481 131 1e-25 seq2476 118 9e-22 seq190 114 1e-20 seq2467 109 5e-19 >seq2481 Length=1366164 Score = 131 bits (144), Expect = 1e-25 Identities = 167/230 (73%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || ||| |||| |||||| | || ||||| || || || | ||| Sbjct 516827 ATGCAGATCTTCGTGAAGACTTTGACTGGCAAGACGATCACTCTCGAGGTCGAGTCCTCC 516768 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | || ||| || ||||| ||||| ||||| || || ||||||||| Sbjct 516767 GACACCATCGATAACGTGAAAGCCAAGATTCAGGACAAGGAAGGAATTCCTCCCGATCAA 516708 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| | || | ||||||||| ||| | ||||| | || |||| ||||||||| Sbjct 516707 CAGCGCCTTATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCACTCTTTCTGATTACAAC 516648 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 || || |||||||| || | || | ||| | ||| | || || ||||| Sbjct 516647 ATCCAGAAGGAGTCTACTCTCCACCTTGTTCTCCGTCTCCGCGGAGGCAT 516598 Score = 107 bits (118), Expect = 2e-18 Identities = 142/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 ||||| || || || || ||| |||| |||||| | || || || ||||| ||| |||| Sbjct 516371 ATGCAAATCTTCGTGAAGACTTTGACGGGCAAGACCATCACCCTCGAAGTTGAATCGTCA 516312 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | || || | ||||| || ||||| || || || || || ||||| || ||| Sbjct 516311 GACACCATCGACAATGTCAAGGCCAAGATTCAGGATAAGGAGGGGATCCCACCTGACCAA 516252 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 ||||| || || | || ||||| || ||||| || | ||| | || ||||||||| Sbjct 516251 CAGCGCTTGATCTTTGCTGGCAAGCAGTTGGAGGATGGCAGGACGCTCTCTGATTACAAC 516192 Query 27168 ATTCAAAAGGAGTCGAC 27184 || || |||||||| || Sbjct 516191 ATCCAGAAGGAGTCCAC 516175 >seq2476 Length=877278 Score = 118 bits (130), Expect = 9e-22 Identities = 145/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || ||||| |||||| | || || || || || ||| | || Sbjct 851021 CATGCAGATCTTCGTTAAGACGCTGACTGGCAAGACCATCACCCTCGAGGTCGAATCATC 851080 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | ||||| || ||||| ||||| || ||||| || ||||| || Sbjct 851081 GGACACCATCGATAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCA 851140 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||||||||| ||| | || ||| | || |||| || ||||| Sbjct 851141 ACAGCGCCTCATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACTCTTTCTGACTACAA 851200 Query 27167 CATTCAAAAGGAGTCGAC 27184 ||| || ||||||||||| Sbjct 851201 CATCCAGAAGGAGTCGAC 851218 >seq190 Length=61660 Score = 114 bits (126), Expect = 1e-20 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || || || |||||| | || ||||| ||||| || | || Sbjct 10173 CATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTTGAGTCCTC 10114 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | ||||| || ||||| ||||| || || || || ||| | || Sbjct 10113 GGACACCATCGATAATGTCAAGGCGAAGATTCAGGACAAGGAGGGTATCCCTCCCAACCA 10054 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | ||||||||||||| | || || | || |||| || ||||| Sbjct 10053 GCAGCGTCTCATCTTCGCCGGCAAACAACTCGAGGATGGCCGTACTCTTTCTGACTACAA 9994 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||||| ||||||||||| | ||| | || | ||| | || ||||| Sbjct 9993 TATTCAGAAGGAGTCGACGCTCCATCTTGTCCTCCGTCTTCGCGGTGG 9946 >seq2467 Length=211848 Score = 109 bits (120), Expect = 5e-19 Identities = 161/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || || || |||||| | || || || || || || | || Sbjct 155641 CATGCAGATCTTCGTGAAGACGCTTACTGGCAAGACCATCACCCTGGAGGTCGAGTCCTC 155700 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 |||| |||| || | || || || || || ||||| || ||||| || |||||||| Sbjct 155701 CGACACGATCGACAACGTAAAGGCGAAGATCCAGGACAAGGAGGGCATCCCTCCCGATCA 155760 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | |||||||| || | || ||| | ||| | || || ||||| Sbjct 155761 ACAGCGCCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAA 155820 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 ||| || |||||||| || | ||| | || |||||| | || || || Sbjct 155821 CATCCAGAAGGAGTCAACGCTCCATCTTGTCTTGCGTCTTCGCGGCGG 155868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434904651142080