Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq2481 113 3e-20 seq190 111 1e-19 seq2467 86.0 4e-12 >seq2481 Length=1366164 Score = 113 bits (124), Expect = 3e-20 Identities = 143/197 (73%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || | || || || |||||||||||||| || || ||| | Sbjct 516827 ATGCAGATCTTCGTGAAGACTTTGACTGGCAAGACGATCACTCTCGAGGTCGAGTCCTCC 516768 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | | ||| || ||| ||||| ||||| | || || |||||| Sbjct 516767 GACACCATCGATAACGTGAAAGCCAAGATTCAGGACAAGGAAGGAATTCCTCCCGATCAA 516708 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || || |||||||| ||||| ||||| | |||||| | ||||||||| Sbjct 516707 CAGCGCCTTATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCACTCTTTCTGATTACAAC 516648 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 516647 ATCCAGAAGGAGTCTAC 516631 >seq190 Length=61660 Score = 111 bits (122), Expect = 1e-19 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || |||||||| || || || ||||||||||||||||| ||| || Sbjct 10172 ATGCAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTTGAGTCCTCG 10113 Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729 ||||| | || ||| | || | || ||| ||||| || ||| | || || | || Sbjct 10112 GACACCATCGATAATGTCAAGGC-GAAGATTCAGGACAAGGAGGGTATCCCTCCCAACCA 10054 Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789 |||||| | || || |||||||||||||| || || | || ||| | || ||||| Sbjct 10053 GCAGCGTCTCATCTTCGCCGGCAAACAACTCGAGGATGGCCGTACTCTTTCTGACTACAA 9994 Query 23790 CATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 9993 TATTCAGAAGGAGTCGAC 9976 >seq2467 Length=211848 Score = 86.0 bits (94), Expect = 4e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670 |||||||| ||||| || || || || || || || ||||| || || || || ||| | Sbjct 155642 ATGCAGATCTTCGTGAAGACGCTTACTGGCAAGACCATCACCCTGGAGGTCGAGTCCTCC 155701 Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730 ||||| | || | |||| || || ||||| || || | || || |||||| Sbjct 155702 GACACGATCGACAACGTAAAGGCGAAGATCCAGGACAAGGAGGGCATCCCTCCCGATCAA 155761 Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAAC 23790 ||||| | || ||||||||||| || || || |||| ||||| | || |||||| Sbjct 155762 CAGCGCCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCGGACTACAAC 155821 Query 23791 ATACAAAAAGAGTCCAC 23807 || || || ||||| || Sbjct 155822 ATCCAGAAGGAGTCAAC 155838 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 337999181804732