Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq2481 167 6e-36 seq2476 138 3e-27 seq190 123 6e-23 seq2407 86.0 1e-11 seq2520 84.2 5e-11 >seq2481 Length=1366164 Score = 167 bits (184), Expect = 6e-36 Identities = 164/212 (77%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || |||||||||||||| || || || |||| |||||||| | | ||| | |||||| Sbjct 516616 AGAACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCT 516675 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || || ||||| || ||||||||||| || ||||| ||||| ||||| ||||||||||| Sbjct 516676 TCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGTTGATCGGGAGGAATTCCTTCCTTGTCC 516735 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||||| ||||||||||| |||| || || || | ||||||||| Sbjct 516736 TGAATCTTGGCTTTCACGTTATCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATCGTC 516795 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| || | ||| | ||||| Sbjct 516796 TTGCCAGTCAAAGTCTTCACGAAGATCTGCAT 516827 Score = 150 bits (166), Expect = 4e-31 Identities = 158/208 (76%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 225506 CAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTA 225565 ||||||| |||||||| || || |||| |||||||| | | || || ||||| || | Sbjct 516164 CAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGAGAGCGTCCTGCCATCCTCCA 516223 Query 225566 GCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGA 225625 |||||| ||||| ||||| | || |||||||| || || || || ||||| || || | Sbjct 516224 ACTGCTTGCCAGCAAAGATCAAGCGCTGTTGGTCAGGTGGGATCCCCTCCTTATCCTGAA 516283 Query 225626 TCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGC 225685 |||| ||| ||| |||||||||||||| | ||| || || | ||||| ||||||| Sbjct 516284 TCTTGGCCTTGACATTGTCGATGGTGTCTGACGATTCAACTTCGAGGGTGATGGTCTTGC 516343 Query 225686 CCGTCAAAGTTTTTATGAACACTTGCAT 225713 |||||||||| || | ||| | |||||| Sbjct 516344 CCGTCAAAGTCTTCACGAAGATTTGCAT 516371 Score = 123 bits (136), Expect = 6e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || || ||||| ||||| || || | || || || | ||| || | ||||| Sbjct 516388 AGGACGAGATGAAGAGTAGATTCCTTCTGAATGTTATAGTCCGACAATGTGCGACCATCC 516447 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || | |||||| |||||||| || | ||||||||||| || ||||| |||||||||||| Sbjct 516448 TCCAACTGCTTTCCAGCGAAAATCAAACGTTGTTGGTCAGGTGGAATTCCTTCCTTGTCT 516507 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||||||| ||| || ||||| ||||| || | || || || | ||||| ||| Sbjct 516508 TGGATCTTTGCCTTAACGTTGTCGATTGTGTCGGAAGACTCAACCTCGAGGGTGATAGTC 516567 Query 225682 TTGCCCGT 225689 || || || Sbjct 516568 TTTCCGGT 516575 Score = 102 bits (112), Expect = 2e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | |||||||| ||||| |||||||| || |||| |||||||| | | || Sbjct 516834 ACGAAGGCGGAGGACAAGATGGAGGGTGGATTCCTTCTGGATGTTGTAATCCGAGAGGGT 516893 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATAC 225610 | ||||| || |||||||| ||||||||||| || || ||||||||||| || |||| Sbjct 516894 GCGACCATCCTCAAGCTGCTTGCCAGCGAAGATGAGGCGCTGTTGGTCGGGTGGGATAC 516952 >seq2476 Length=877278 Score = 138 bits (152), Expect = 3e-27 Identities = 163/221 (74%), Gaps = 0/221 (0%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | ||||||||||||||| || || || || |||| ||||| || | | ||| Sbjct 851242 CGAAGACGCAGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTG 851183 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | || || || || ||||| || |||||||| || || ||||||||||| || || || Sbjct 851182 CGGCCGTCCTCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGAGGGATGCCC 851123 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| || ||||| ||| || ||||||||||| || | ||| || || | Sbjct 851122 TCCTTGTCCTGAATCTTCGCCTTGACGTTATCGATGGTGTCCGATGATTCGACCTCGAGG 851063 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| |||| || || | ||| | ||||| Sbjct 851062 GTGATGGTCTTGCCAGTCAGCGTCTTAACGAAGATCTGCAT 851022 Score = 95.1 bits (104), Expect = 3e-14 Identities = 85/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||||||||| ||||||||||| || || | ||||| || | | || | || || Sbjct 850714 AGGACAAGGTGTAGAGTGGATTCCTTCTGAATGTTGTAGTCCGAGAGGGTACGTCCGTCC 850655 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT 225608 || |||||||||||||||||||| || |||||||| |||||||| || Sbjct 850654 TCGAGCTGCTTCCCAGCGAAGATGAGACGTTGTTGATCGGGCGGGAT 850608 >seq190 Length=61660 Score = 123 bits (136), Expect = 6e-23 Identities = 160/221 (72%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | |||||||| ||||| || || || || || | |||||| || | | ||| Sbjct 9952 CGAAGACGGAGGACAAGATGGAGCGTCGACTCCTTCTGAATATTGTAGTCAGAAAGAGTA 10011 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||| || || || || || |||||||| || || || |||| ||| || ||||| Sbjct 10012 CGGCCATCCTCGAGTTGTTTGCCGGCGAAGATGAGACGCTGCTGGTTGGGAGGGATACCC 10071 Query 225613 TCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAAC 225672 |||||||| || ||||| ||| ||| ||||||||||| |||| || || || | Sbjct 10072 TCCTTGTCCTGAATCTTCGCCTTGACATTATCGATGGTGTCCGAGGACTCAACTTCGAGA 10131 Query 225673 GTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 ||||| |||||||| || | || || | ||| | ||||| Sbjct 10132 GTGATGGTCTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 10172 Score = 86.0 bits (94), Expect = 1e-11 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | || || | ||| || || || || || |||| ||||| |||| | || Sbjct 10467 ACGAAGGCGCAACACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTACTCGGAGAGGGT 10526 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAAT 225608 | ||||||||| |||||||| || |||||||| || |||||||||||||| || || Sbjct 10527 GCGCCCATCTTCGAGCTGCTTGCCGGCGAAGATCAGGCGTTGTTGGTCGGGTGGGAT 10583 >seq2407 Length=893 Score = 86.0 bits (94), Expect = 1e-11 Identities = 119/166 (72%), Gaps = 2/166 (1%) Strand=Plus/Minus Query 225493 CGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTT 225552 ||||| | | |||||| ||||| | | || || || | || || || | | ||| Sbjct 168 CGAAGACGTAAGACAAGATGGAGCATCAACTCCTTCTGAATGTTTTAGTCAGAAAGAGTG 109 Query 225553 CTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCT 225612 | ||||||||| || ||||| || |||||||| || || ||||||||||| || || || Sbjct 108 CGCCCATCTTCGAGTTGCTTGCCGGCGAAGATGAGACGCTGTTGGTCGGGAGGGATGCCC 49 Query 225613 TCCT--TGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGA 225656 |||| |||| |||||||| ||| || ||||| ||||| || Sbjct 48 TCCTAATGTCCTGGATCTTGGCCTTTACGTTATCGATCGTGTCGGA 3 >seq2520 Length=409667 Score = 84.2 bits (92), Expect = 5e-11 Identities = 84/109 (77%), Gaps = 0/109 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| | || |||||||| || || |||| ||||| ||| | ||| | || ||| Sbjct 285897 AGGACCAAATGAAGAGTGGACTCCTTCTGGATGTTGTAGTCGCTGAGAGTGCGACCGTCT 285838 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATAC 225610 || || ||||| ||||||||||| || |||||||||||||| || |||| Sbjct 285837 TCGAGTTGCTTTCCAGCGAAGATTAGGCGTTGTTGGTCGGGTGGGATAC 285789 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1192492558635126