Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1750 129 5e-25 >seq1750 Length=1054334 Score = 129 bits (142), Expect = 5e-25 Identities = 352/534 (66%), Gaps = 5/534 (1%) Strand=Plus/Plus Query 4563 TGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCT 4622 |||| || || ||||| | || || || || || || || | || || | ||| || Sbjct 413662 TGCATGCCCTCATCTCTACAGATGAGCTCATTGGAGAAGGTAAGGCCAGGTAGTAATCCA 413721 Query 4623 CTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCG 4682 | ||| || ||||||||||| | || || || ||||||||||||||||| |||||||| Sbjct 413722 CGCTTCTTGAGCCAAAATATTGAAGCGAACGATCCAGAAAAGAATATGCCCTCTACGGCA 413781 Query 4683 GCAAACGCTACTAATCGGGACCCGAACG-AGCTGGCTTTGTCTTTAATCCATTTTAATGC 4741 || || || || | || |||| | || | | |||||||| |||||| | || Sbjct 413782 GCGAATGCAACGAGGCGTACAGCGAATGAAGATCG-TTTGTCTTCTATCCATCGGAGAGC 413840 Query 4742 CCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAATTTACTTTT 4801 ||| | || |||| ||| | || || || || | || || | |||| | Sbjct 413841 CCATTCTGCCTTTTGCTTGATACATGGTATGGTTTCAATGGCATCGAATAGGTGCTGGCG 413900 Query 4802 TTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATT 4861 |||| || |||| ||||| || || || || | ||| | || ||||||||||| Sbjct 413901 TTCATTCGGCTCTTTGATATAGGTATCAATGAGCATAGAATAGGTCTCCGAATGTATATT 413960 Query 4862 TTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACA 4921 ||| || || || |||||||| || || | ||||||| ||||| |||||| | | Sbjct 413961 TTCCATCATTATTTGGAATCCGTAGAAACAGCGCGCTTCTGCGACTTGGACTTCGCTTGA 414020 Query 4922 AAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAAC 4981 || | ||| || | ||| || || || || || || || || || || || | | Sbjct 414021 GAAGCGTTCAACAAGGTTCTCATTGACGATGCCATCCGACGCCGCGAAGAAGGCGAGGAT 414080 Query 4982 ATGAGATATAAAGTACTGTTCGTC-AGGCTTAA--GTTTTTTCCAGTGGGGCAAATCTTT 5038 | || || ||| | |||| || | |||| | ||||||| | | ||||| Sbjct 414081 GCGGGAGATGAAGAATCGTTCATCGTCGGTTAATCGAAGATTCCAGTCCATCCAGTCTTT 414140 Query 5039 AGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACAT 5092 || | ||||| ||||| || |||||||| || || | ||| | |||||||| Sbjct 414141 AGAGAGATCAATCTCTTCGACGGTCCAAAAAGAAGCCTGCGCCTGCTTGTACAT 414194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427036437397157