Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1750 150 2e-31 >seq1750 Length=1054334 Score = 150 bits (166), Expect = 2e-31 Identities = 267/389 (69%), Gaps = 3/389 (1%) Strand=Plus/Plus Query 48162 CCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGACCGGGCATTAGTCCACGTTTT 48221 || |||||||||| || | || || || || || || || || | || |||||| || Sbjct 413668 CCCTCATCTCTACAGATGAGCTCATTGGAGAAGGTAAGGCCAGGTAGTAATCCACGCTTC 413727 Query 48222 TTGAGCCAAAATATTGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACGGCCGCAAAT 48281 |||||||||||||||| ||||| |||||||||||||||||||| |||||||| || ||| Sbjct 413728 TTGAGCCAAAATATTGAAGCGAACGATCCAGAAAAGAATATGCCCTCTACGGCAGCGAAT 413787 Query 48282 GCGGTAAGTCTCTCTCCG---TAACTGGCTTCGTTGTGTATCCACCGTTGTGCCCAATCA 48338 || || | | || || || || | |||||| || | ||||| || Sbjct 413788 GCAACGAGGCGTACAGCGAATGAAGATCGTTTGTCTTCTATCCATCGGAGAGCCCATTCT 413847 Query 48339 GCCTTCTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCATTG 48398 ||||| | ||| | ||| || || ||||| || |||| || || | |||||| Sbjct 413848 GCCTTTTGCTTGATACATGGTATGGTTTCAATGGCATCGAATAGGTGCTGGCGTTCATTC 413907 Query 48399 CTATCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATT 48458 ||||| | || ||||| || | | | ||| | || || || |||||||| || Sbjct 413908 GGCTCTTTGATATAGGTATCAATGAGCATAGAATAGGTCTCCGAATGTATATTTTCCATC 413967 Query 48459 GCCATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGT 48518 || || |||||||| ||||| | |||||||| || || || || | | || ||| Sbjct 413968 ATTATTTGGAATCCGTAGAAACAGCGCGCTTCTGCGACTTGGACTTCGCTTGAGAAGCGT 414027 Query 48519 TCAGCCAAATTCTCATTTACTATTCCATC 48547 ||| | | |||||||| || || ||||| Sbjct 414028 TCAACAAGGTTCTCATTGACGATGCCATC 414056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694646839782560