Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_031038.1 Length=222832 Score E Sequences producing significant alignments: (Bits) Value seq1750 150 3e-31 >seq1750 Length=1054334 Score = 150 bits (166), Expect = 3e-31 Identities = 271/392 (69%), Gaps = 7/392 (2%) Strand=Plus/Plus Query 46650 GCCTTCATCTCTACTAATTAATTCGTTAGAAAATGTGAGCCCAGGCATTAGTCCACGCTT 46709 ||| |||||||||| || | || || || || || || ||||| | || ||||||||| Sbjct 413667 GCCCTCATCTCTACAGATGAGCTCATTGGAGAAGGTAAGGCCAGGTAGTAATCCACGCTT 413726 Query 46710 TTTGAGCCAAAATATAGCCGCGAAAGATCCAGAAAAGAATATGCCTTCTACAGCCGCGAA 46769 |||||||||||||| | ||||| |||||||||||||||||||| ||||| || ||||| Sbjct 413727 CTTGAGCCAAAATATTGAAGCGAACGATCCAGAAAAGAATATGCCCTCTACGGCAGCGAA 413786 Query 46770 TGCGACAAGTCTCTCTCCGTAACTGGCATCATT----ATGAATCCACCTTTGAGCCCAAT 46825 ||| || || | | || || ||| || | ||||| | ||||||| | Sbjct 413787 TGCAACGAGGCGTACAGCG-AATGAAGATCGTTTGTCTTCTATCCATCGGAGAGCCCATT 413845 Query 46826 CAGCCTTTTTCTTTACACAAGGCATTGTTTCTATAGCATTAAAGAGAAAGtttttttCAT 46885 | ||||||| ||| | ||| || || ||||| || |||| || || | ||||| Sbjct 413846 CTGCCTTTTGCTTGATACATGGTATGGTTTCAATGGCATCGAATAGGTGCTGGCGTTCAT 413905 Query 46886 CACTATCTTTAACATATGTATCTATTAAAAGACTATACATTTCTGAATGAATGTTTTCAA 46945 ||||| | ||| ||||| || | | | ||| | || ||||| || ||||| | Sbjct 413906 TCGGCTCTTTGATATAGGTATCAATGAGCATAGAATAGGTCTCCGAATGTATATTTTCCA 413965 Query 46946 TAGCCATCTGAAATCCGTAAAAACATCTTGCTTCAGTAATCTGTACCTCTGTACAAAATC 47005 | || || |||||||| ||||| | ||||| | | || || || | | || | Sbjct 413966 TCATTATTTGGAATCCGTAGAAACAGCGCGCTTCTGCGACTTGGACTTCGCTTGAGAAGC 414025 Query 47006 GTTCAGACAA-ATTCTCATTCACTATTCCATC 47036 ||||| |||| |||||||| || || ||||| Sbjct 414026 GTTCA-ACAAGGTTCTCATTGACGATGCCATC 414056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 712911862361280