Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq2481 143 6e-29 seq190 136 9e-27 seq2476 104 5e-17 seq2467 86.0 1e-11 >seq2481 Length=1366164 Score = 143 bits (158), Expect = 6e-29 Identities = 163/219 (74%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 151886 GAGTCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCT 151945 ||| | ||| ||||| || ||||||||||| || |||||||||||||| | | ||| | Sbjct 516609 GAGACGGAGAACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCG 516668 Query 151946 CCCATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTC 152005 |||||||| || || |||||||||||||| | ||| || || | | |||||||| Sbjct 516669 GCCATCTTCGAGTTGCTTGCCGGCGAAGATAAGGCGCTGTTGATCGGGAGGAATTCCTTC 516728 Query 152006 CTTTTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGT 152065 ||| || ||||| || ||| || | || | | |||| || ||| || || ||||| Sbjct 516729 CTTGTCCTGAATCTTGGCTTTCACGTTATCGATGGTGTCGGAGGACTCGACCTCGAGAGT 516788 Query 152066 AATAGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 || || ||||| || | |||||||||||||| |||||| Sbjct 516789 GATCGTCTTGCCAGTCAAAGTCTTCACGAAGATCTGCAT 516827 Score = 109 bits (120), Expect = 1e-18 Identities = 149/208 (72%), Gaps = 0/208 (0%) Strand=Plus/Plus Query 151897 CAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTCTA 151956 |||| || ||||| ||||| || |||||||||||||| | | || || ||||| || | Sbjct 516164 CAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGAGAGCGTCCTGCCATCCTCCA 516223 Query 151957 GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTGAA 152016 || || || ||||| | | ||| ||||| | | ||| || ||||| || |||| Sbjct 516224 ACTGCTTGCCAGCAAAGATCAAGCGCTGTTGGTCAGGTGGGATCCCCTCCTTATCCTGAA 516283 Query 152017 TTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTTGC 152076 | || |||||| | || | | ||||||| || ||||| || || || || |||| Sbjct 516284 TCTTGGCCTTGACATTGTCGATGGTGTCTGACGATTCAACTTCGAGGGTGATGGTCTTGC 516343 Query 152077 CCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||| | |||||||||||||| ||||| Sbjct 516344 CCGTCAAAGTCTTCACGAAGATTTGCAT 516371 Score = 96.9 bits (106), Expect = 8e-15 Identities = 151/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Plus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 ||||| |||||||||||||| || || || ||||| || || | || || | ||||| Sbjct 516388 AGGACGAGATGAAGAGTAGATTCCTTCTGAATGTTATAGTCCGACAATGTGCGACCATCC 516447 Query 151953 TCTA--GGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTT 152010 || | ||||| || ||||| || | | || ||||| | | ||||||||||| | Sbjct 516448 TCCAACTGCTTT--CCAGCGAAAATCAAACGTTGTTGGTCAGGTGGAATTCCTTCCTTGT 516505 Query 152011 CTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAG 152070 |||| || ||| || || | || | |||| ||| ||| || || || || |||| Sbjct 516506 CTTGGATCTTTGCCTTAACGTTGTCGATTGTGTCGGAAGACTCAACCTCGAGGGTGATAG 516565 Query 152071 TTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 | || || ||||| ||||| || |||| |||||| Sbjct 516566 TCTTTCCGGTGAGGGTCTTGACAAAGATCTGCAT 516599 >seq190 Length=61660 Score = 136 bits (150), Expect = 9e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 151892 GAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATC 151951 |||||||||||| || || ||||| || || || ||||| || | | ||| | ||||| Sbjct 9960 GAGGACAAGATGGAGCGTCGACTCCTTCTGAATATTGTAGTCAGAAAGAGTACGGCCATC 10019 Query 151952 TTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTC 152011 || || ||| ||||||||||| || | |||||||| | | ||| || ||||| || Sbjct 10020 CTCGAGTTGTTTGCCGGCGAAGATGAGACGCTGCTGGTTGGGAGGGATACCCTCCTTGTC 10079 Query 152012 TTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGT 152071 ||||| || |||||| | || | | |||| || ||| ||||| ||||| || || Sbjct 10080 CTGAATCTTCGCCTTGACATTATCGATGGTGTCCGAGGACTCAACTTCGAGAGTGATGGT 10139 Query 152072 TTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| ||||| ||||||||||||| |||||| Sbjct 10140 CTTGCCAGTGAGGGTCTTCACGAAGATCTGCAT 10172 >seq2476 Length=877278 Score = 104 bits (114), Expect = 5e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 151893 AGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCT 151952 |||||||| || || || ||||| || ||||||||||| || | | ||| | || || Sbjct 851233 AGGACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCGTCC 851174 Query 151953 TCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCT 152012 || || || ||||||||||| || | ||| ||||| | | ||| || ||||| || Sbjct 851173 TCGAGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCC 851114 Query 152013 TGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTT 152072 ||||| || ||||| | || | | |||| || || || || || || || || Sbjct 851113 TGAATCTTCGCCTTGACGTTATCGATGGTGTCCGATGATTCGACCTCGAGGGTGATGGTC 851054 Query 152073 TTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || ||||| ||||||| |||||| Sbjct 851053 TTGCCAGTCAGCGTCTTAACGAAGATCTGCAT 851022 >seq2467 Length=211848 Score = 86.0 bits (94), Expect = 1e-11 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 151895 GACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCCATCTTC 151954 ||||||||| || || ||||| || ||||||||||| || | | || | || || || Sbjct 155851 GACAAGATGGAGCGTTGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTC 155792 Query 151955 TAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTTTTCTTG 152014 || || ||||| ||||| || | ||| || || | | ||| || ||||| || || Sbjct 155791 GAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGATCGGGAGGGATGCCCTCCTTGTCCTG 155732 Query 152015 AATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAATAGTTTT 152074 || || || || | || | |||| || ||| || || || || || || || Sbjct 155731 GATCTTCGCCTTTACGTTGTCGATCGTGTCGGAGGACTCGACCTCCAGGGTGATGGTCTT 155672 Query 152075 GCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||| || || ||||||||||||| |||||| Sbjct 155671 GCCAGTAAGCGTCTTCACGAAGATCTGCAT 155642 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1153783412960959