Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq2467 140 2e-28 seq2481 123 2e-23 seq2476 113 3e-20 seq190 104 2e-17 >seq2467 Length=211848 Score = 140 bits (154), Expect = 2e-28 Identities = 161/217 (74%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 44125 CAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTC 44184 ||| || || || ||||| |||||| ||||||||||| || | ||| ||| |||| Sbjct 155854 CAAGACAAGATGGAGCGTTGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTC 155795 Query 44185 GTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTC 44244 || |||||||| ||||||||||| | ||||| ||||| | ||| | || ||||| || Sbjct 155794 CTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGTTGATCGGGAGGGATGCCCTCCTTGTC 155735 Query 44245 CGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 | |||||| ||| | | | || ||||||| ||| || ||||||| || || || Sbjct 155734 CTGGATCTTCGCCTTTACGTTGTCGATCGTGTCGGAGGACTCGACCTCCAGGGTGATGGT 155675 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCATGATG 44341 ||| || || || |||||||||||||| |||||| || Sbjct 155674 CTTGCCAGTAAGCGTCTTCACGAAGATCTGCATGCTG 155638 >seq2481 Length=1366164 Score = 123 bits (136), Expect = 2e-23 Identities = 155/210 (74%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| || || |||||| |||||||||||||| | || ||| | || || Sbjct 516619 ACAAGGTGGAGAGTAGACTCCTTCTGGATGTTGTAATCAGAAAGAGTGCGGCCATCTTCG 516678 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| ||||| | ||||| ||||| | ||| | |||||||| ||| Sbjct 516679 AGTTGCTTGCCGGCGAAGATAAGGCGCTGTTGATCGGGAGGAATTCCTTCCTTGTCCTGA 516738 Query 44249 ATCTTCTGCTTCAATGTT-CCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| |||| | ||| | |||||||||| ||| || ||||| | || |||||||| Sbjct 516739 ATCTT-GGCTTTCACGTTATCGATGGTGTCGGAGGACTCGACCTCGAGAGTGATCGTCTT 516797 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 || || | |||||||||||||| ||||| Sbjct 516798 GCCAGTCAAAGTCTTCACGAAGATCTGCAT 516827 Score = 118 bits (130), Expect = 8e-22 Identities = 156/213 (73%), Gaps = 5/213 (2%) Strand=Plus/Plus Query 44128 CACCA-GGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGT 44186 ||||| |||| || ||| |||||| |||||||||||||| | ||| | | || | Sbjct 516161 CACCAAGGTGCAGAGTGGACTCCTTCTGGATGTTGTAATCAGAGAGCGTCCTGCCATCCT 516220 Query 44187 CCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCG 44246 ||| |||||| || ||||||||||| ||||| || || | || | || ||||| ||| Sbjct 516221 CCAACTGCTTGCCAGCAAAGATCAAGCGCTGTTGGTCAGGTGGGATCCCCTCCTTATCCT 516280 Query 44247 TTATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGT 44304 ||||| ||| || ||| | |||||||| | ||||| || || | || || || Sbjct 516281 GAATCTTGGCCTTGACATTGT--CGATGGTGTCTGACGATTCAACTTCGAGGGTGATGGT 516338 Query 44305 CTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| ||||| | |||||||||||||||||||| Sbjct 516339 CTTGCCCGTCAAAGTCTTCACGAAGATTTGCAT 516371 Score = 98.7 bits (108), Expect = 7e-16 Identities = 150/211 (71%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || ||||| || ||||| || ||||| || || | | | ||| | || ||| Sbjct 516391 ACGAGATGAAGAGTAGATTCCTTCTGAATGTTATAGTCCGACAATGTGCGACCATCCTCC 516450 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 | |||||| || || || |||||||| || || || | || | |||||||| || Sbjct 516451 AACTGCTTTCCAGCGAAAATCAAACGTTGTTGGTCAGGTGGAATTCCTTCCTTGTCTTGG 516510 Query 44249 ATCTTCTGCTTCAATGTTC-CTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTT 44307 ||||| ||| | || ||| | || ||||||| || || ||||| | || || ||||| Sbjct 516511 ATCTT-TGCCTTAACGTTGTCGATTGTGTCGGAAGACTCAACCTCGAGGGTGATAGTCTT 516569 Query 44308 TCCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 ||| ||||||||||| || ||||| |||||| Sbjct 516570 TCCGGTGAGGGTCTTGACAAAGATCTGCATG 516600 >seq2476 Length=877278 Score = 113 bits (124), Expect = 3e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || ||||| ||||| |||||| ||||||||||| || | || ||| |||| || Sbjct 851230 ACAAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCAGAAAGAGTGCGGCCGTCCTCG 851171 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || ||||| ||||| ||||| | ||||| || || | ||| | || ||||| ||| Sbjct 851170 AGTTGCTTGCCGGCGAAGATGAGGCGCTGTTGGTCGGGAGGGATGCCCTCCTTGTCCTGA 851111 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | |||||||| | ||||| ||||| | || || ||||| Sbjct 851110 ATCTTCGCCTTGACGTTATCGATGGTGTCCGATGATTCGACCTCGAGGGTGATGGTCTTG 851051 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || || ||||| |||||||| |||||| Sbjct 851050 CCAGTCAGCGTCTTAACGAAGATCTGCATG 851021 >seq190 Length=61660 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 || || || ||||| |||||| || || ||||| || | || || | || || Sbjct 9964 ACAAGATGGAGCGTCGACTCCTTCTGAATATTGTAGTCAGAAAGAGTACGGCCATCCTCG 10023 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 || || || ||||| ||||| | ||||||||| | | ||| | ||| ||||| ||| Sbjct 10024 AGTTGTTTGCCGGCGAAGATGAGACGCTGCTGGTTGGGAGGGATACCCTCCTTGTCCTGA 10083 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 |||||| ||| | | | |||||||| | ||| || || || | || || ||||| Sbjct 10084 ATCTTCGCCTTGACATTATCGATGGTGTCCGAGGACTCAACTTCGAGAGTGATGGTCTTG 10143 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || |||||||||||||||||||| |||||| Sbjct 10144 CCAGTGAGGGTCTTCACGAAGATCTGCATG 10173 Score = 86.0 bits (94), Expect = 5e-12 Identities = 89/117 (76%), Gaps = 0/117 (0%) Strand=Plus/Plus Query 44107 CATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATC 44166 ||| || || | || | |||||||| ||||||||| |||||| ||||||||||| || Sbjct 10458 CATACCACCACGAAGGCGCAACACCAAGTGAAGCGTTGACTCCTTCTGGATGTTGTACTC 10517 Query 44167 GGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || ||| |||| | || || |||||||| ||||| ||||||| || || || || Sbjct 10518 GGAGAGGGTGCGCCCATCTTCGAGCTGCTTGCCGGCGAAGATCAGGCGTTGTTGGTC 10574 Score = 84.2 bits (92), Expect = 2e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 44234 CCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCC 44293 || ||||| ||| |||||| ||||| | | || ||||| | ||| ||||| ||| Sbjct 10357 CCCTCCTTGTCCTGGATCTTCGCCTTCACATTATCGATCGTGTCCGAGGACTCCACTTCC 10416 Query 44294 ACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | |||||||||||| ||||| || |||||||||||||| ||||| Sbjct 10417 AGCGTAATCGTCTTGCCCGTAAGCGTCTTCACGAAGATCTGCAT 10460 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359979304308393