Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20ostreatus_20[genbank_20GCA_5F001956935.1_202017-01-19] 2,529 sequences; 35,820,573 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq2481 179 9e-40 seq2476 156 1e-32 seq190 156 1e-32 seq2407 100 7e-16 seq2520 87.8 4e-12 >seq2481 Length=1366164 Score = 179 bits (198), Expect = 9e-40 Identities = 164/207 (79%), Gaps = 0/207 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| ||| | || || || |||||||| |||||||| || ||| ||| Sbjct 516824 CAGATCTTCGTGAAGACTTTGACTGGCAAGACGATCACTCTCGAGGTCGAGTCCTCCGAC 516765 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| ||||| ||| |||||||||||||| |||||||| ||||| || || || Sbjct 516764 ACCATCGATAACGTGAAAGCCAAGATTCAGGACAAGGAAGGAATTCCTCCCGATCAACAG 516705 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || |||||||||||||| || || ||||||||||| | |||||| | ||||| ||| || Sbjct 516704 CGCCTTATCTTCGCCGGCAAGCAACTCGAAGATGGCCGCACTCTTTCTGATTACAACATC 516645 Query 178104 CAAAAAGAATCAACACTGCATCTTGTT 178130 || || || || || || || |||||| Sbjct 516644 CAGAAGGAGTCTACTCTCCACCTTGTT 516618 Score = 145 bits (160), Expect = 2e-29 Identities = 155/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||||||| ||| | || || || || ||||||||||| || ||| |||||| Sbjct 516368 CAAATCTTCGTGAAGACTTTGACGGGCAAGACCATCACCCTCGAAGTTGAATCGTCAGAC 516309 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| ||||||||||| || || || ||||| || ||||| || Sbjct 516308 ACCATCGACAATGTCAAGGCCAAGATTCAGGATAAGGAGGGGATCCCACCTGACCAACAG 516249 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | ||||| || || || ||| | || ||||| ||||| || | ||||| ||| || Sbjct 516248 CGCTTGATCTTTGCTGGCAAGCAGTTGGAGGATGGCAGGACGCTCTCTGATTACAACATC 516189 Query 178104 CAAAAAGAATCAACACTGCATCTTG 178128 || || || || || ||||| |||| Sbjct 516188 CAGAAGGAGTCCACTCTGCACCTTG 516164 Score = 129 bits (142), Expect = 1e-24 Identities = 152/206 (74%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || || || || || ||||| ||||| || |||||||||||||| || || ||| Sbjct 516596 CAGATCTTTGTCAAGACCCTCACCGGAAAGACTATCACCCTCGAGGTTGAGTCTTCCGAC 516537 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || ||||| ||||| || |||||| || ||||| |||||||| || || ||||| ||| Sbjct 516536 ACAATCGACAACGTTAAGGCAAAGATCCAAGACAAGGAAGGAATTCCACCTGACCAACAA 516477 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || | || ||||| ||||| ||| | || ||||| | || | | || |||||| | Sbjct 516476 CGTTTGATTTTCGCTGGAAAGCAGTTGGAGGATGGTCGCACATTGTCGGACTATAACATT 516417 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || ||||| || || ||||| || Sbjct 516416 CAGAAGGAATCTACTCTTCATCTCGT 516391 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || ||||| |||||||| ||||| |||||||| || || ||| ||| Sbjct 517100 CAGATATTCGTCAAGACTCTTACAGGAAAGACGATTACCCTCGAAGTCGAGTCCTCTGAC 517041 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 || || || ||||| || |||||||||||||| ||||| Sbjct 517040 ACGATTGACAACGTGAAGGCTAAGATTCAGGACAAGGAAGG 517000 Score = 84.2 bits (92), Expect = 5e-11 Identities = 79/101 (78%), Gaps = 0/101 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || ||||| ||||| || |||||||||||||||||| ||| || Sbjct 517379 CAAATCTTCGTTAAGACACTCACCGGAAAGACCATCACCCTCGAGGTGGAATCCTCCGAT 517320 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| || || || ||||| || ||||| || || Sbjct 517319 ACCATCGACAATGTTAAGGCCAAGATCCAAGACAAGGAGGG 517279 >seq2476 Length=877278 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || ||||| || || || || || || || |||||||||||||| ||| || ||| Sbjct 851025 CAGATCTTCGTTAAGACGCTGACTGGCAAGACCATCACCCTCGAGGTCGAATCATCGGAC 851084 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| |||||||| |||||||||||||| || || |||||||| ||||| || Sbjct 851085 ACCATCGATAACGTCAAGGCGAAGATTCAGGACAAGGAGGGCATCCCTCCCGACCAACAG 851144 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| || || ||||| || || | |||||| | || || ||| || Sbjct 851145 CGCCTCATCTTCGCCGGCAAGCAACTCGAGGACGGCCGCACTCTTTCTGACTACAACATC 851204 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || || ||||| Sbjct 851205 CAGAAGGAGTCGACGCTCCACCTTGT 851230 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || ||||| ||||| || ||||||||||||||||| || || Sbjct 850448 CAAATCTTCGTCAAGACCCTCACTGGAAAGACTATCACCCTCGAGGTGGAGTCGTCCGAT 850507 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| |||||||| ||||| |||||||| || || Sbjct 850508 ACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAGGG 850548 >seq190 Length=61660 Score = 156 bits (172), Expect = 1e-32 Identities = 158/206 (77%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 || || |||||||| || ||||| || || || ||||| ||||| || || ||| ||| Sbjct 10169 CAGATCTTCGTGAAGACCCTCACTGGCAAGACCATCACTCTCGAAGTTGAGTCCTCGGAC 10110 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 |||||||| || ||||| |||||||||||||| || || |||||||| ||||||| Sbjct 10109 ACCATCGATAATGTCAAGGCGAAGATTCAGGACAAGGAGGGTATCCCTCCCAACCAGCAG 10050 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || || ||||||||||| ||||| ||||| ||||| | |||||| | || || || | Sbjct 10049 CGTCTCATCTTCGCCGGCAAACAACTCGAGGATGGCCGTACTCTTTCTGACTACAATATT 9990 Query 178104 CAAAAAGAATCAACACTGCATCTTGT 178129 || || || || || || |||||||| Sbjct 9989 CAGAAGGAGTCGACGCTCCATCTTGT 9964 Score = 84.2 bits (92), Expect = 5e-11 Identities = 81/103 (79%), Gaps = 1/103 (1%) Strand=Plus/Minus Query 178026 ATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACT 178085 ||||| || ||||| ||||| || ||||||||||| || |||||||||||||| | || Sbjct 10583 ATCCCACCCGACCAACAACGCCTGATCTTCGCCGGCAAGCAGCTCGAAGATGGGCGCACC 10524 Query 178086 CTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTG 178128 || |||| || ||| |||| || || ||||| || || |||| Sbjct 10523 CTCTCCGAGTACAACATCCAGAAGGAGTCAACGCTTCA-CTTG 10482 >seq2407 Length=893 Score = 100 bits (110), Expect = 7e-16 Identities = 117/157 (75%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 177978 TCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACA--AAGAAGGAATCCCTCCGG 178035 || ||||| ||||| ||||| || ||||| ||||||| | || || |||||||| | Sbjct 3 TCCGACACGATCGATAACGTAAAGGCCAAGATCCAGGACATTAGGAGGGCATCCCTCCCG 62 Query 178036 ACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATT 178095 |||| || || || ||||||||||| || || ||||||||||| | |||||| | || | Sbjct 63 ACCAACAGCGTCTCATCTTCGCCGGCAAGCAACTCGAAGATGGGCGCACTCTTTCTGACT 122 Query 178096 ATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTT 178132 | ||| | || || || | | || |||||||| || Sbjct 123 AAAACATTCAGAAGGAGTTGATGCTCCATCTTGTCTT 159 >seq2520 Length=409667 Score = 87.8 bits (96), Expect = 4e-12 Identities = 80/101 (79%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || || || || || || || |||||||| |||||||| ||| ||| Sbjct 285585 CAAATCTTCGTCAAGACCCTAACGGGGAAGACTATCACCCTTGAGGTGGAGTCCTCCGAC 285644 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGG 178024 |||||||| || ||||| || ||||||||||||||||| Sbjct 285645 ACCATCGACAATGTCAAGGCCAAAATTCAGGACAAAGAAGG 285685 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203692195723626