Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pleurotus_20salmoneostramineus_20[genbank_20GCA_5F001742905.1_202016 -08-09] 26,934 sequences; 65,897,893 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq1431 120 3e-22 >seq1431 Length=25833 Score = 120 bits (132), Expect = 3e-22 Identities = 275/409 (67%), Gaps = 4/409 (1%) Strand=Plus/Plus Query 16985 CCCTCGTCTCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTC 17044 |||||||| | |||||| || || || || || || | ||| ||||| ||| || ||| Sbjct 3938 CCCTCGTCACGGCTGATCAGCTCATTGGAGAAGGTAAGCCCTGGCATGAGTCCACGCTTC 3997 Query 17045 TTTAACCAAAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAAC 17104 || | ||| || || || ||||| || ||||| ||||| || || || || | || || Sbjct 3998 TTCAGCCAGAAGATGGCTGCGAAGGATCCAGAGAAGAAGATGCCTTCCACTGCGGCGAAG 4057 Query 17105 GCGATTAATCGTTCGGCGTACGTCGCGTCTTTGTTACGA-ATCCATTTCTGCACCCACTC 17163 |||| | ||||| || | || | | ||| | || ||||| | | |||| || Sbjct 4058 GCGACGAGGCGTTCAGCAAAGGTAGAC-CGTTGATCGGAGATCCAATGAAGGGCCCAGTC 4116 Query 17164 GGCTTTTTGCTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTG 17223 || || |||| |||||| || ||||| || || | || | | || ||| | Sbjct 4117 AGCCTTGCGCTTGATGCAAGGAATGGTTTCGATCGCGTCGAAGAGGTAGTCGCGTTCG-G 4175 Query 17224 TAGG-TCGATTATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCA 17282 || || | || || ||||||||||| ||| || ||||| ||| |||||||||| Sbjct 4176 CAGCATCTTTAATGTAGGTATCGATGAGAAGGGAATAGGTTTCGCTGTGGATGTTCTCCA 4235 Query 17283 TGGCTATCTGAAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATC 17342 | || || || ||||| ||||| || |||||||| ||| ||||| | | || | Sbjct 4236 TCATAATTTGGAAGCCGTAGAAGCAACGAGCTTCCGCAGCTTGGACTTCGTTGGAAAAAC 4295 Query 17343 GTTCCGCTAGATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGC 17391 |||| | | |||||||| || || ||||| || ||||| || || Sbjct 4296 GTTCAACCAAGTTTTCGTTGACAATACCGTCTGAGGCAGCGAAGAAGGC 4344 Score = 107 bits (118), Expect = 2e-18 Identities = 377/583 (65%), Gaps = 13/583 (2%) Strand=Plus/Minus Query 16942 TTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGAT 17001 || ||||| | || | ||| || || |||||| || | ||||| |||| |||||| Sbjct 6223 TTGAAGATAACTGAAGAGCAGGCAAGCAAAATCGGTGTGCATGCCCTCATCTCGGCTGAT 6164 Query 17002 AAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGC 17061 ||||||||| ||||| || | || ||||| || || ||||| | ||| || || || Sbjct 6163 AAGTTCGTTTGAAAAGGTAAGACCAGGCATGAGCCCGCGCTTCTTGAGCCAGAAGATGGC 6104 Query 17062 GGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGC 17121 ||||| || ||||| ||||||||||| || ||| || || |||| | ||||| | Sbjct 6103 CGCGAATGATCCAGAGAAGAATATACCTTCAACGACCGCGAATGCGACGAGCCGTTCTCC 6044 Query 17122 GTACGTCG--CGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATG 17179 | | | | | | || ||||| |||| || || |||| || || Sbjct 6043 AAAGGATGAATGCCGATCTT--CTATCCAGCGGATGGCCCAGTCTGCCTTTTCTTTGATA 5986 Query 17180 CAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGG---TCGATTATA 17236 ||| || || || || || | || | | || | ||| ||| || | || Sbjct 5985 CAAGGTATGGTCTCGATCGCGTCGAAAA---GGTGTTGTCGCTGGAGGGGTTCCTTGATG 5929 Query 17237 TACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAAT 17296 || |||||||| || | || | || ||||||||||||||||| ||| || || Sbjct 5928 TATGTATCGATAAGCATAGAATAGGTCTCCGAGTGTATGTTCTCCATCATTATTTGGAAG 5869 Query 17297 CCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTT 17356 |||||||| |||| | || || | ||| || || | |||||||| | || ||| Sbjct 5868 CCGTAAAAACATCTAACCTCAGCAACTTGGACCTCATTAGAAAATCGTTCGACCAGGTTT 5809 Query 17357 TCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTT 17416 || || || || ||||| || ||||| || || | | ||| ||||| | | Sbjct 5808 TCATTAACTATTCCGTCCGAAGCTGCGAAGAAAGCAAGGACATGGGATATGAAGAAGCGT 5749 Query 17417 TCGTCC-GGTGTA--AGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCG 17473 |||||| || | | | ||| ||| | | || ||||| ||||| | |||||| Sbjct 5748 TCGTCCTCGTTCAGCCGTAGAGTCCAATCCATCCAGTCCTTGGACATATCAATTTCTTCC 5689 Query 17474 GGGGTCCAAAAACTAGCCACTGCCTTTTTATACATATTCCAAA 17516 ||||||||| ||| ||||| ||| ||||| ||||||| Sbjct 5688 ACGGTCCAAAATGACGCCTGTGCCTGTTTGTACATTTTCCAAA 5646 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517371355335120